RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ZNFX1Q9P2E3 1918 aaKnown RBP4.64□□□□□ -1.67
LINC00648-202ENST00000555985 SPDYE16A6NNV3 312 aaPredicted RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 SGSM2O43147 1006 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 PLA2G6O60733 806 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 GCLCP48506 637 aaPredicted RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 MRE11P49959 708 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 MORN1Q5T089 497 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 CLEC10AQ8IUN9 316 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 GTF3C2Q8WUA4 911 aaPredicted RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 LPAR1Q92633 364 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 MS4A3Q96HJ5 214 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 ABHD8Q96I13 439 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 P2RX7Q99572 595 aaKnown RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 VCPKMTQ9H867 229 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 KANSL2Q9H9L4 492 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 HPS5Q9UPZ3 1129 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 NEDD4P46934 1319 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 RIOK3O14730 519 aaKnown RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 SNHG28P0DPA3 235 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 EEF2P13639 858 aaKnown RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 PRMT2P55345 433 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 HERVK_113P62684 666 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 IRF5Q13568 498 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 TNS4Q8IZW8 715 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 KCNB2Q92953 911 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 RNF25Q96BH1 459 aaPredicted RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 LSG1Q9H089 658 aaKnown RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 INCENPQ9NQS7 918 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 CPA4Q9UI42 421 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 PCDHB13Q9Y5F0 798 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 ALPK3Q96L96 1907 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 DOCK3Q8IZD9 2030 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L15C9J2P7 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L13C9JLJ4 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L11C9JVI0 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L18D6R9N7 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L22D6RA61 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L17D6RBQ6 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L19D6RCP7 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L20D6RJB6 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 ATP2A1O14983 1001 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 WDR46O15213 610 aaKnown RBP4.63□□□□□ -1.67
LINC00648-202ENST00000555985 OSBPP22059 807 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 TIE1P35590 1138 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 PTH1RQ03431 593 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 CTDSPL2Q05D32 466 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 USP17L24Q0WX57 530 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 Q3C1V9 767 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 GADL1Q6ZQY3 521 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 KIAA1211Q6ZU35 1233 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 MAP4K1Q92918 833 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 CEP95Q96GE4 821 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 GMCL1Q96IK5 515 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 ZNF333Q96JL9 665 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 BTBD7Q9P203 1132 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 PNMA3Q9UL41 463 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 TAF6LQ9Y6J9 622 aa4.63□□□□□ -1.67
LINC00648-202ENST00000555985 TERF1P54274 439 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 ICA1Q05084 483 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 PABPC4Q13310 644 aaKnown RBP eCLIP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 RAB3GAP1Q15042 981 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 MAP3K21Q5TCX8 1036 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 BTNL9Q6UXG8 535 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 UBE2Q1Q7Z7E8 422 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 SPRYD3Q8NCJ5 442 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 DCBLD2Q96PD2 775 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 NACAP1Q9BZK3 213 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 NAPBQ9H115 298 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 RPAP3Q9H6T3 665 aaPredicted RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 CABP5Q9NP86 173 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 SRRDQ9UH36 339 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 RABGAP1Q9Y3P9 1069 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 MKI67P46013 3256 aaKnown RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 TRIM6-TRIM34B2RNG4 842 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 GALR2O43603 387 aaPredicted RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 PEX10O60683 326 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 TDO2P48775 406 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 MFAP1P55081 439 aaKnown RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 ERVK-9P63128 1117 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 ERVK-24P63145 666 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 BECN1Q14457 450 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 NECTIN1Q15223 517 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 SEC23AQ15436 765 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 AKNAD1Q5T1N1 836 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 CWC27Q6UX04 472 aaKnown RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 SHCBP1Q8NEM2 672 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 PXYLP1Q8TE99 480 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 RILPL2Q969X0 211 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 IL17RAQ96F46 866 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 TMOD4Q9NZQ9 345 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 ZNF214Q9UL59 606 aaPredicted RBP4.62□□□□□ -1.67
LINC00648-202ENST00000555985 GABRQQ9UN88 632 aa4.62□□□□□ -1.67
LINC00648-202ENST00000555985 ZNF536O15090 1300 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 NMT2O60551 498 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 TTLL1O95922 423 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 NDUFB10O96000 172 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 HOXC6P09630 235 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 XRCC5P13010 732 aaKnown RBP4.61□□□□□ -1.67
LINC00648-202ENST00000555985 PDE4BQ07343 736 aa4.61□□□□□ -1.67
LINC00648-202ENST00000555985 COL9A3Q14050 684 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms