RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 USP17L12C9JPN9 530 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 USP17L21D6R901 530 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 PRDM1O75626 825 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 GNAQP50148 359 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 PAK1Q13153 545 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 ITPK1Q13572 414 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 PTPN21Q16825 1174 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 GALNT17Q6IS24 598 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 KLHL10Q6JEL2 608 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 RAD9BQ6WBX8 426 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 SRBD1Q8N5C6 995 aaKnown RBP18.29■□□□□ 0.52
TUBB3-209ENST00000555609 MSL3Q8N5Y2 521 aaKnown RBP18.29■□□□□ 0.52
TUBB3-209ENST00000555609 ANKS1AQ92625 1134 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
TUBB3-209ENST00000555609 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 CCDC151A5D8V7 595 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 SOWAHDA6NJG2 315 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 H7C1D1 291 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 HNRNPLLQ8WVV9 542 aaKnown RBP18.29■□□□□ 0.52
TUBB3-209ENST00000555609 ANKRD2Q9GZV1 360 aa18.29■□□□□ 0.52
TUBB3-209ENST00000555609 MRPL44Q9H9J2 332 aaKnown RBP18.29■□□□□ 0.52
TUBB3-209ENST00000555609 XDHP47989 1333 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 STX17P56962 302 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 RRAGBQ5VZM2 374 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 CTNND2Q9UQB3 1225 aa18.28■□□□□ 0.52
TUBB3-209ENST00000555609 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
TUBB3-209ENST00000555609 KRT31Q15323 416 aa18.27■□□□□ 0.52
TUBB3-209ENST00000555609 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
TUBB3-209ENST00000555609 DESI2Q9BSY9 194 aa18.27■□□□□ 0.52
TUBB3-209ENST00000555609 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.52
TUBB3-209ENST00000555609 SPATA31A1Q5TZJ5 1347 aa18.27■□□□□ 0.52
TUBB3-209ENST00000555609 CTAGE9A4FU28 777 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 N4BP3O15049 544 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 GYPCP04921 128 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 CASP14P31944 242 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 KCNB1Q14721 858 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 KARSQ15046 597 aaKnown RBP18.26■□□□□ 0.51
TUBB3-209ENST00000555609 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 SPTY2D1Q68D10 685 aaPredicted RBP18.26■□□□□ 0.51
TUBB3-209ENST00000555609 ILDR2Q71H61 639 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 PARD6BQ9BYG5 372 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 MYH2Q9UKX2 1941 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 LAD1O00515 517 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 TBC1D8O95759 1140 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 RPN1P04843 607 aaKnown RBP18.26■□□□□ 0.51
TUBB3-209ENST00000555609 CHMP4BP1P59074 171 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 MTF1Q14872 753 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 WHAMMP3Q1A5X7 153 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 TCP11X2Q5H9J9 407 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 BLIDQ8IZY5 108 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 C4orf32Q8N8J7 132 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 DAGLBQ8NCG7 672 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 ZNF384Q8TF68 577 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 NOC3LQ8WTT2 800 aaKnown RBP18.26■□□□□ 0.51
TUBB3-209ENST00000555609 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
TUBB3-209ENST00000555609 TRPC5Q9UL62 973 aaPredicted RBP18.26■□□□□ 0.51
TUBB3-209ENST00000555609 CYP2D7A0A087X1C5 515 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 CYP2C19P33261 490 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 MECOMQ03112 1051 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 NELFBQ8WX92 580 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 ABHD10Q9NUJ1 306 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 RAB21Q9UL25 225 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 PCDHA4Q9UN74 947 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 LAMB1P07942 1786 aa18.25■□□□□ 0.51
TUBB3-209ENST00000555609 A0A1W2PQC6 194 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 WNT7AO00755 349 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 HIBADHP31937 336 aaKnown RBP18.24■□□□□ 0.51
TUBB3-209ENST00000555609 USP5P45974 858 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 MSANTD4Q8NCY6 345 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 CUEDC2Q9H467 287 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 MAST2Q6P0Q8 1798 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 hCG_1642624A0A1W2PR95 340 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 KCNJ18B7U540 433 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 ERLIN1O75477 346 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 EEF1GP26641 437 aaKnown RBP18.24■□□□□ 0.51
TUBB3-209ENST00000555609 PPP1R2P41236 205 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 STIM1Q13586 685 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 KCNJ12Q14500 433 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 CCDC148Q8NFR7 591 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 CPLX3Q8WVH0 158 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 LZTS2Q9BRK4 669 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 GBP3Q9H0R5 595 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 KAT14Q9H8E8 782 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 CALCOCO1Q9P1Z2 691 aa18.24■□□□□ 0.51
TUBB3-209ENST00000555609 TSPY2A6NKD2 308 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 MCM7P33993 719 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
TUBB3-209ENST00000555609 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
TUBB3-209ENST00000555609 VPS72Q15906 364 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 IL17AQ16552 155 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 ZNF662Q6ZS27 426 aa18.23■□□□□ 0.51
TUBB3-209ENST00000555609 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms