RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CCDC148Q8NFR7 591 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 DEF6Q9H4E7 631 aa12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 PUF60Q9UHX1 559 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 PDS5AQ29RF7 1337 aaKnown RBP12.07□□□□□ -0.48
MTHFD1-210ENST00000555252 A0A0G2JS52 829 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 VSNL1P62760 191 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 APTXQ7Z2E3 356 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 IGSF22Q8N9C0 903 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 RUBCNQ92622 972 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 LZTFL1Q9NQ48 299 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 RBM28Q9NW13 759 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 A6NNZ2 444 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 BTBD18B2RXH4 712 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 SHOX2O60902 331 aaPredicted RBP12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 NT5C2P49902 561 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 SEC23AQ15436 765 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 CDKAL1Q5VV42 579 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 NCAPGQ9BPX3 1015 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 FAM204AQ9H8W3 233 aa12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
MTHFD1-210ENST00000555252 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 BMP15O95972 392 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 FGRP09769 529 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 AMPD2Q01433 879 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 RBL2Q08999 1139 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 MMS22LQ6ZRQ5 1243 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 ZNF662Q6ZS27 426 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 TADA2BQ86TJ2 420 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 SLC35F6Q8N357 371 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 CEP89Q96ST8 783 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 RIOK1Q9BRS2 568 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 FBXO2Q9UK22 296 aaPredicted RBP12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 MYO6Q9UM54 1294 aa12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
MTHFD1-210ENST00000555252 TNKSO95271 1327 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 MINDY4BA8MYZ0 360 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 GUCY1A2P33402 732 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 USP8P40818 1118 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 TOB1P50616 345 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 SPAG1Q07617 926 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 MTF1Q14872 753 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 CYP26C1Q6V0L0 522 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ZSCAN10Q96SZ4 725 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 MYCBPQ99417 103 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ZKSCAN3Q9BRR0 538 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ATXN2Q99700 1313 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 CNTNAP4Q9C0A0 1308 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 N4BP1O75113 896 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 RNF40O75150 1001 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 USP14P54578 494 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 CKAP4Q07065 602 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ERFEQ4G0M1 354 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 ZSWIM4Q9H7M6 989 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 MINPP1Q9UNW1 487 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 KCNJ14Q9UNX9 436 aa12.04□□□□□ -0.48
MTHFD1-210ENST00000555252 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 LRRIQ3A6PVS8 624 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 ACTN4O43707 911 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 DDAH1O94760 285 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 GYG1P46976 350 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 GBP6Q6ZN66 633 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 FBXO33Q7Z6M2 555 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 ANKRD2Q9GZV1 360 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 DUOX1Q9NRD9 1551 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 A0A1B0GUL6 1792 aa12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 MYH14Q7Z406 1995 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-210ENST00000555252 LRRC10BA6NIK2 292 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 PSMD14O00487 310 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 SYF2O95926 243 aaKnown RBP12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 KRT2P35908 639 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 CUL4BQ13620 913 aa12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 IFIT1BQ5T764 474 aaKnown RBP12.02□□□□□ -0.48
MTHFD1-210ENST00000555252 TRAPPC11Q7Z392 1133 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms