RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, human

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC1-208	ENST00000555240	NBPF9	Q3BBW0	867 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	LCE4A	Q5TA78	99 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	INTS3	Q68E01	1043 aa	Known RBP	4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	ZSWIM9	Q86XI8	627 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	TMEM192	Q8IY95	271 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	CCDC144CP	Q8IYA2	1237 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	DHX38	Q92620	1227 aa	Known RBP	4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	TMEM59L	Q9UK28	342 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	PCDHB12	Q9Y5F1	795 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	PCDHA11	Q9Y5I1	949 aa		4.86	□□□□□ -1.63
CASC1-208	ENST00000555240	DNAJC25-GNG10	A0A024R161	153 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	GUCY2C	P25092	1073 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	ERCC5	P28715	1186 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	EIF6	P56537	245 aa	Known RBP	4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	RALGPS1	Q5JS13	557 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	TMC3	Q7Z5M5	1100 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	LSR	Q86X29	649 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	RASGRP4	Q8TDF6	673 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	KIRREL1	Q96J84	757 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	PRDM14	Q9GZV8	571 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	ADAMTS10	Q9H324	1103 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	ACBD3	Q9H3P7	528 aa		4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	SUCO	Q9UBS9	1254 aa	Known RBP	4.85	□□□□□ -1.63
CASC1-208	ENST00000555240	MEIS1	O00470	390 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	PRAMEF1	O95521	474 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	ACR	P10323	421 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	TCF3	P15923	654 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	GJA8	P48165	433 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	SOX9	P48436	509 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	NASP	P49321	788 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	PCBP3	P57721	371 aa	Known RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	SNW1	Q13573	536 aa	Known RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	AUH	Q13825	339 aa	Known RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	TMEM67	Q5HYA8	995 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	MPZL3	Q6UWV2	235 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	RUFY4	Q6ZNE9	571 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	OXR1	Q8N573	874 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	TAB3	Q8N5C8	712 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	ZNF655	Q8N720	491 aa	Predicted RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	DAGLB	Q8NCG7	672 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	SRRT	Q9BXP5	876 aa	Known RBP	4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	HDAC8	Q9BY41	377 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	CAPN10	Q9HC96	672 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	CHST7	Q9NS84	486 aa		4.84	□□□□□ -1.63
CASC1-208	ENST00000555240	CARMIL2	Q6F5E8	1435 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	SIGLEC6	O43699	453 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	RPL10	P27635	214 aa	Known RBP	4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	PMS1	P54277	932 aa	Known RBP	4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	DUSP4	Q13115	394 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	GNL2	Q13823	731 aa	Known RBP	4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	PPP2R5E	Q16537	467 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	BBS9	Q3SYG4	887 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	FYB2	Q5VWT5	728 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	TDRD10	Q5VZ19	366 aa	Known RBP	4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	UNC5A	Q6ZN44	842 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	RNF111	Q6ZNA4	994 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	VPS37D	Q86XT2	251 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	OR6P1	Q8NGX9	317 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	ABHD4	Q8TB40	342 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	MYLIP	Q8WY64	445 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	SMARCC1	Q92922	1105 aa	Predicted RBP	4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	TCTN2	Q96GX1	697 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	SEC16B	Q96JE7	1060 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	DSCC1	Q9BVC3	393 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	KRTAP4-11	Q9BYQ6	195 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	FAM86C1	Q9NVL1	165 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	C19orf73	Q9NVV2	129 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	GFOD1	Q9NXC2	390 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	ZMYM5	Q9UJ78	669 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	TCFL5	Q9UL49	500 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240	SLC12A7	Q9Y666	1083 aa		4.83	□□□□□ -1.64
CASC1-208	ENST00000555240		C9IYK1	514 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	TP53	P04637	393 aa	Predicted RBP	4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	GLI1	P08151	1106 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	SYP	P08247	313 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	GIPR	P48546	466 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	TEK	Q02763	1124 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	ZYX	Q15942	572 aa	Known RBP	4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	NOL9	Q5SY16	702 aa	Known RBP	4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	OGFOD2	Q6N063	350 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	WAPL	Q7Z5K2	1190 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	SPPL2C	Q8IUH8	684 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	C7orf61	Q8IZ16	206 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	USHBP1	Q8N6Y0	703 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	PDZD8	Q8NEN9	1154 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	FOXP3	Q9BZS1	431 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	FAM53C	Q9NYF3	392 aa		4.82	□□□□□ -1.64
CASC1-208	ENST00000555240	FITM1	A5D6W6	292 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	LRRC10B	A6NIK2	292 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	FKTN	O75072	461 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	ZGLP1	P0C6A0	271 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	ERVFC1	P60507	584 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	CHRNE	Q04844	493 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	CWF19L1	Q69YN2	538 aa	Known RBP	4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	LINC00116	Q8NCU8	138 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	STRIP2	Q9ULQ0	834 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	MINPP1	Q9UNW1	487 aa		4.81	□□□□□ -1.64
CASC1-208	ENST00000555240	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms