RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 RHBDL3P58872 404 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 RRP12Q5JTH9 1297 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 C16orf86Q6ZW13 317 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 RSRC2Q7L4I2 434 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 NLRP3Q96P20 1036 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 RWDD2AQ9UIY3 292 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 TNS1Q9HBL0 1735 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 SLU7O95391 586 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 PTGDRQ13258 359 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 KCNB1Q14721 858 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 ISM2Q6H9L7 571 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 CNNM4Q6P4Q7 775 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 CERS3Q8IU89 383 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 PYM1Q9BRP8 204 aaKnown RBP14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 KBTBD4Q9NVX7 518 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 PPP2R2CQ9Y2T4 447 aa14.36□□□□□ -0.11
PPP4R3A-206ENST00000554943 ADRA2BP18089 450 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 RASA1P20936 1047 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZNF662Q6ZS27 426 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 TADA3O75528 432 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 MYL1P05976 194 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 SNHG28P0DPA3 235 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 SMIM5Q71RC9 77 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 NAA15Q9BXJ9 866 aaKnown RBP14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 CCSER1Q9C0I3 900 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZMYND12Q9H0C1 365 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 BARHL2Q9NY43 387 aa14.35□□□□□ -0.11
PPP4R3A-206ENST00000554943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■■■□□ 16.9
PPP4R3A-206ENST00000554943 GTPBP6O43824 516 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 XBP1P17861 261 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 DMTNQ08495 405 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 FAM98CQ17RN3 349 aaKnown RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 CCDC178Q5BJE1 867 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZNF507Q8TCN5 953 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 SETDB2Q96T68 719 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 SPATA31A6Q5VVP1 1343 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 ORC2Q13416 577 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 SPTY2D1Q68D10 685 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZNF397Q8NF99 534 aaPredicted RBP14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 LAD1O00515 517 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 GABPAQ06546 454 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 FBXO38Q6PIJ6 1188 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 TPTE2Q6XPS3 522 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 WDR66Q8TBY9 1149 aa14.34□□□□□ -0.11
PPP4R3A-206ENST00000554943 USP17L8P0C7I0 530 aa14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 ZNF658Q5TYW1 1059 aaPredicted RBP14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 STAG2Q8N3U4 1231 aa14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 NUP133Q8WUM0 1156 aa14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 TTYH3Q9C0H2 523 aa14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 MRFAP1Q9Y605 127 aa14.33□□□□□ -0.11
PPP4R3A-206ENST00000554943 SLX4Q8IY92 1834 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 TEX33O43247 280 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 GYPCP04921 128 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 WWC2Q6AWC2 1192 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 DNAI1Q9UI46 699 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 ESYT2A0FGR8 921 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 NFIXQ14938 502 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 FAM47AQ5JRC9 791 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 BLIDQ8IZY5 108 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 ZBTB9Q96C00 473 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 LRRC4BQ9NT99 713 aa14.33□□□□□ -0.12
PPP4R3A-206ENST00000554943 TOP1P11387 765 aaKnown RBP14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 ADSSL1Q8N142 457 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 BAG1Q99933 345 aaPredicted RBP14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 SRRTQ9BXP5 876 aaKnown RBP14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 MYO3BQ8WXR4 1341 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 GOLGA6L9A6NEM1 432 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 MFAP3LO75121 409 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 KCNQ4P56696 695 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 CCDC51Q96ER9 411 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 FHOD1Q9Y613 1164 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 SCN9AQ15858 1988 aa14.32□□□□□ -0.12
PPP4R3A-206ENST00000554943 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 RHOBTB3O94955 611 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 CALML3P27482 149 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 GOLGA8FQ08AF8 430 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 GOLGA8DPQ0D2H9 430 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 RAD9BQ6WBX8 426 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 TRMT44Q8IYL2 757 aaKnown RBP14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 RIOX1Q9H6W3 641 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 RNF225M0QZC1 329 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 SERPINC1P01008 464 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 EHHADHQ08426 723 aa14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 NBPF5PQ86XG9 351 aaPredicted RBP14.31□□□□□ -0.12
PPP4R3A-206ENST00000554943 DISC1Q9NRI5 854 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms