RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 GNPATO15228 680 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 PDIA3P30101 505 aaKnown RBP15.41■□□□□ 0.06
VTI1B-204ENST00000554659 TCIRG1Q13488 830 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 TACC3Q9Y6A5 838 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 LONRF2Q1L5Z9 754 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 TRAPPC3LQ5T215 181 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 CCT6BQ92526 530 aa15.41■□□□□ 0.06
VTI1B-204ENST00000554659 SCRN1Q12765 414 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 MYOCDQ8IZQ8 938 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 FBXO18Q8NFZ0 1043 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 PPP1R13BQ96KQ4 1090 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 MED23Q9ULK4 1368 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 TTC36A6NLP5 189 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 TRPC3Q13507 836 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 LGSNQ5TDP6 509 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 IL17REQ8NFR9 667 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 GDAP1L1Q96MZ0 367 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 ADD1P35611 737 aaKnown RBP15.4■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC170Q8IYT3 715 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 CCDC87Q9NVE4 849 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 SMCO2A6NFE2 343 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 MAP2K2P36507 400 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 APBA1Q02410 837 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 GALNT17Q6IS24 598 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 GOLGA5Q8TBA6 731 aa15.4■□□□□ 0.06
VTI1B-204ENST00000554659 RGS16O15492 202 aaPredicted RBP15.39■□□□□ 0.06
VTI1B-204ENST00000554659 RNF40O75150 1001 aa15.39■□□□□ 0.06
VTI1B-204ENST00000554659 CRCPO75575 148 aa15.39■□□□□ 0.06
VTI1B-204ENST00000554659 CLIC4Q9Y696 253 aa15.39■□□□□ 0.06
VTI1B-204ENST00000554659 IKBKBO14920 756 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 HARSP12081 509 aaKnown RBP15.39■□□□□ 0.05
VTI1B-204ENST00000554659 STAT1P42224 750 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 ITIH3Q06033 890 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 PPP6R2O75170 966 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 XRCC5P13010 732 aaKnown RBP15.39■□□□□ 0.05
VTI1B-204ENST00000554659 CTSWP56202 376 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 KDM5CP41229 1560 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 CA8P35219 290 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 PDE1CQ14123 709 aaPredicted RBP15.39■□□□□ 0.05
VTI1B-204ENST00000554659 RBM26Q5T8P6 1007 aaKnown RBP15.39■□□□□ 0.05
VTI1B-204ENST00000554659 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 CAPS2Q9BXY5 557 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 PDE6AP16499 860 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 KRT15P19012 456 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 TMCO4Q5TGY1 634 aa15.39■□□□□ 0.05
VTI1B-204ENST00000554659 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 STK10O94804 968 aaKnown RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 FGAP02671 866 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 RASSF2P50749 326 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 GUCY2FP51841 1108 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 SLC8A3P57103 927 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 SLC39A14Q15043 492 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 ZNF827Q17R98 1081 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 DNAJC10Q8IXB1 793 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 MICAL1Q8TDZ2 1067 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 PPANQ9NQ55 473 aaKnown RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 MYO1AQ9UBC5 1043 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 CDC23Q9UJX2 597 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 I3L4J1 428 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 FAM47AQ5JRC9 791 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 DCUN1D2Q6PH85 259 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 SRGAP1Q7Z6B7 1085 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 COPRSQ9NQ92 184 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 POLR3EQ9NVU0 708 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 BTG4Q9NY30 223 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 ERVV-2B6SEH9 535 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 DDAH1O94760 285 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 U2AF1L4Q8WU68 220 aaKnown RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 TACO1Q9BSH4 297 aaKnown RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 HOMER3Q9NSC5 361 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 EPN1Q9Y6I3 576 aaPredicted RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 KCNK3O14649 394 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 RPN1P04843 607 aaKnown RBP15.38■□□□□ 0.05
VTI1B-204ENST00000554659 MCTP2Q6DN12 878 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 PHLDB2Q86SQ0 1253 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 P3H4Q92791 437 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 TNKSO95271 1327 aa15.38■□□□□ 0.05
VTI1B-204ENST00000554659 KRIT1O00522 736 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
VTI1B-204ENST00000554659 CLIC6Q96NY7 704 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 CD2BP2O95400 341 aaKnown RBP15.37■□□□□ 0.05
VTI1B-204ENST00000554659 SCG2P13521 617 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 MAPKAPK5Q8IW41 473 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 RNF10Q8N5U6 811 aaKnown RBP15.37■□□□□ 0.05
VTI1B-204ENST00000554659 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
VTI1B-204ENST00000554659 GSDMAQ96QA5 445 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms