RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 NPHP3Q7Z494 1330 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 EVC2Q86UK5 1308 aa6.48□□□□□ -1.37
ATXN3-220ENST00000553491 MARF1Q9Y4F3 1742 aaKnown RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 COL16A1Q07092 1604 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 USP32Q8NFA0 1604 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 GPRASP1Q5JY77 1395 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 JCADQ9P266 1359 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 SHPRHQ149N8 1683 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 CELA3AP09093 270 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 MAP7Q14244 749 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 MAP1SQ66K74 1059 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 INTS5Q6P9B9 1019 aaKnown RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 TBC1D32Q96NH3 1257 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 C8orf37Q96NL8 207 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
ATXN3-220ENST00000553491 MED1Q15648 1581 aaPredicted RBP6.47□□□□□ -1.37
ATXN3-220ENST00000553491 FAM170BA6NMN3 283 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 NEFMP07197 916 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 RING1Q06587 406 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 CPSF6Q16630 551 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATXN3-220ENST00000553491 MSMPQ1L6U9 139 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 TTF2Q9UNY4 1162 aaKnown RBP6.46□□□□□ -1.38
ATXN3-220ENST00000553491 AHDC1Q5TGY3 1603 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-220ENST00000553491 ACEP12821 1306 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 PRR36Q9H6K5 1346 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.38
ATXN3-220ENST00000553491 RGPD5Q99666 1765 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 TRIM37O94972 964 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 FOSL1P15407 271 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 NTF4P34130 210 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 ERVK-24P63145 666 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 TTLL4Q14679 1199 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 ZNF394Q53GI3 561 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 SCARA3Q6AZY7 606 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 GGT7Q9UJ14 662 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
ATXN3-220ENST00000553491 AKAP12Q02952 1782 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 PPIP5K1Q6PFW1 1433 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 GRIK1P39086 918 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 PTPN11Q06124 597 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 PCNX4Q63HM2 1172 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 HS2ST1Q7LGA3 356 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 ERMP1Q7Z2K6 904 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 NBPF11Q86T75 865 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 TGIF2Q9GZN2 237 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 COPRSQ9NQ92 184 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 DDX41Q9UJV9 622 aaKnown RBP6.44□□□□□ -1.38
ATXN3-220ENST00000553491 CYP8B1Q9UNU6 501 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 TULP4Q9NRJ4 1543 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
ATXN3-220ENST00000553491 RALGAPBQ86X10 1494 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 HCLS1P14317 486 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-220ENST00000553491 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
ATXN3-220ENST00000553491 RACK1P63244 317 aaKnown RBP6.43□□□□□ -1.38
ATXN3-220ENST00000553491 TMF1P82094 1093 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 LLGL2Q6P1M3 1020 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 NFXL1Q6ZNB6 911 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 RNF214Q8ND24 703 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 GIMAP7Q8NHV1 300 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 METTL22Q9BUU2 404 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-220ENST00000553491 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 SAMM50Q9Y512 469 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 AFF2P51816 1311 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 SPATA31A3Q5VYP0 1347 aa6.43□□□□□ -1.38
ATXN3-220ENST00000553491 ANKARQ7Z5J8 1434 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 EVA1CP58658 441 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 LRRC14Q15048 493 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 ZNF772Q68DY9 489 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-220ENST00000553491 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-220ENST00000553491 USP48Q86UV5 1035 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 GAL3ST3Q96A11 431 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 ISL2Q96A47 359 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 ACBD3Q9H3P7 528 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 PCOLCE2Q9UKZ9 415 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-220ENST00000553491 TOPAZ1Q8N9V7 1692 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 PNPLA6Q8IY17 1366 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 USP47Q96K76 1375 aa6.42□□□□□ -1.38
ATXN3-220ENST00000553491 TRPM3Q9HCF6 1732 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-220ENST00000553491 PXDNQ92626 1479 aa6.41□□□□□ -1.38
ATXN3-220ENST00000553491 MAP2P11137 1827 aaKnown RBP6.41□□□□□ -1.38
ATXN3-220ENST00000553491 F6X3S4 739 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms