RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 USP17L10C9JJH3 530 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
TMEM260-204ENST00000553335 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 CATIPQ7Z7H3 387 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 SGMS1Q86VZ5 419 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 ZNF280CQ8ND82 737 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 ABT1Q9ULW3 272 aaKnown RBP11.39□□□□□ -0.59
TMEM260-204ENST00000553335 TMX2Q9Y320 296 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 SLC12A7Q9Y666 1083 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 TLL2Q9Y6L7 1015 aa11.39□□□□□ -0.59
TMEM260-204ENST00000553335 KLF18A0A0U1RQI7 1052 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 C19orf81C9J6K1 198 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CALM1P0DP23 149 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CALM2P0DP24 149 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CALM3P0DP25 149 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 USP14P54578 494 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 APOBRQ0VD83 1088 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 PPIL2Q13356 520 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 TOB2Q14106 344 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-204ENST00000553335 SAPCD2Q86UD0 394 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CLEC10AQ8IUN9 316 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 DNAJC5GQ8N7S2 189 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 OPTNQ96CV9 577 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 CLMNQ96JQ2 1002 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 ZSCAN31Q96LW9 406 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-204ENST00000553335 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-204ENST00000553335 NAP1L2Q9ULW6 460 aaPredicted RBP11.38□□□□□ -0.59
TMEM260-204ENST00000553335 AFG3L2Q9Y4W6 797 aa11.38□□□□□ -0.59
TMEM260-204ENST00000553335 LOC285556D6RIA3 1793 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 CXCL11O14625 94 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ZBTB43O43298 467 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 RAD21O60216 631 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 DDAH1O94760 285 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ECE1P42892 770 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ZNF157P51786 506 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-204ENST00000553335 RCAN1P53805 252 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 BACE1P56817 501 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 SPP2Q13103 211 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 PPP2R5BQ15173 497 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 NOL8Q76FK4 1167 aaKnown RBP11.37□□□□□ -0.59
TMEM260-204ENST00000553335 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ZNF654Q8IZM8 581 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
TMEM260-204ENST00000553335 GMCL1P1Q8NEA9 526 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ACER1Q8TDN7 264 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
TMEM260-204ENST00000553335 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 KIAA1683Q9H0B3 1180 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
TMEM260-204ENST00000553335 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 TRIM75PA6NK02 468 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 F5H6K3 240 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-204ENST00000553335 EVCP57679 992 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 KLRC3Q07444 240 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 ZYXQ15942 572 aaKnown RBP11.36□□□□□ -0.59
TMEM260-204ENST00000553335 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 HSCBQ8IWL3 235 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 CTCFLQ8NI51 663 aaPredicted RBP11.36□□□□□ -0.59
TMEM260-204ENST00000553335 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 DCAF4Q8WV16 495 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 LPAR1Q92633 364 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 SNX21Q969T3 373 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 WNK4Q96J92 1243 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 BRPF3Q9ULD4 1205 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 MYH6P13533 1939 aa11.36□□□□□ -0.59
TMEM260-204ENST00000553335 CCDC196A0A1B0GTZ2 297 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 IRF6O14896 467 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 KIF5BP33176 963 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 ANP32AP39687 249 aaKnown RBP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 TROAPQ12815 778 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 SNAPC2Q13487 334 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 MTMR2Q13614 643 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 BECN1Q14457 450 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 FASTKD5Q7L8L6 764 aaKnown RBP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 C12orf42Q96LP6 360 aa11.35□□□□□ -0.59
TMEM260-204ENST00000553335 SLKQ9H2G2 1235 aaPredicted RBP11.35□□□□□ -0.59
TMEM260-204ENST00000553335 SH2B1Q9NRF2 756 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms