RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
NEK3-203ENST00000551355 SLC26A6Q9BXS9 759 aa12.06□□□□□ -0.48
NEK3-203ENST00000551355 ZHX2Q9Y6X8 837 aa12.06□□□□□ -0.48
NEK3-203ENST00000551355 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
NEK3-203ENST00000551355 hCG_1984214I3L0E3 225 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 WDR46O15213 610 aaKnown RBP12.05□□□□□ -0.48
NEK3-203ENST00000551355 STX6O43752 255 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 RAD21O60216 631 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 JAK2O60674 1132 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 BACE1P56817 501 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 FUT2Q10981 343 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 TRAF1Q13077 416 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 PRKG1Q13976 671 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 TRIM29Q14134 588 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 LDLRAD1Q5T700 205 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 NBPF11Q86T75 865 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 FAM160B2Q86V87 743 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
NEK3-203ENST00000551355 ZNF713Q8N859 430 aaPredicted RBP12.05□□□□□ -0.48
NEK3-203ENST00000551355 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 CHURC1Q8WUH1 139 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 RRP36Q96EU6 259 aaKnown RBP12.05□□□□□ -0.48
NEK3-203ENST00000551355 DDX11Q96FC9 970 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 RIOX1Q9H6W3 641 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 SEC63Q9UGP8 760 aaKnown RBP12.05□□□□□ -0.48
NEK3-203ENST00000551355 SNCAIPQ9Y6H5 919 aa12.05□□□□□ -0.48
NEK3-203ENST00000551355 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 H3BQV1 296 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 CXCL11O14625 94 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 PLEKHA8P1O95397 391 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 SYT1P21579 422 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 ECE1P42892 770 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 SPP2Q13103 211 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 BTNL9Q6UXG8 535 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 STAG2Q8N3U4 1231 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 PHKBQ93100 1093 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 C8orf76Q96K31 380 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 GBA2Q9HCG7 927 aaPredicted RBP12.04□□□□□ -0.48
NEK3-203ENST00000551355 SH3GLB2Q9NR46 395 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 MTMR7Q9Y216 660 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 AFG3L2Q9Y4W6 797 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 ATP6V1DQ9Y5K8 247 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
NEK3-203ENST00000551355 CNTNAP5Q8WYK1 1306 aa12.04□□□□□ -0.48
NEK3-203ENST00000551355 TRAF5O00463 557 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 FDX1P10109 184 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 FDPSP14324 419 aaKnown RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 STAT2P52630 851 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 PPIL2Q13356 520 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 MTMR2Q13614 643 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 SH3D19Q5HYK7 790 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 SLC10A4Q96EP9 437 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 PNMA2Q9UL42 364 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 FRMPD2Q68DX3 1309 aaPredicted RBP12.03□□□□□ -0.48
NEK3-203ENST00000551355 MYH8P13535 1937 aa12.03□□□□□ -0.48
NEK3-203ENST00000551355 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 BRD1O95696 1058 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 SCG2P13521 617 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
NEK3-203ENST00000551355 IKQ13123 557 aaPredicted RBP12.02□□□□□ -0.49
NEK3-203ENST00000551355 SAFBQ15424 915 aaKnown RBP eCLIP12.02□□□□□ -0.49
NEK3-203ENST00000551355 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 DLK2Q6UY11 383 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 KCTD1Q719H9 257 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
NEK3-203ENST00000551355 FBXO18Q8NFZ0 1043 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 ZSCAN16Q9H4T2 348 aaPredicted RBP12.02□□□□□ -0.49
NEK3-203ENST00000551355 ZNF408Q9H9D4 720 aa12.02□□□□□ -0.49
NEK3-203ENST00000551355 TRIM75PA6NK02 468 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 KIF3CO14782 793 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 ZBTB5O15062 677 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 CYTH3O43739 400 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 TOMM70O94826 608 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 ZSCAN22P10073 491 aaPredicted RBP12.01□□□□□ -0.49
NEK3-203ENST00000551355 CALML3P27482 149 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 FAM83BQ5T0W9 1011 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 FASTKD5Q7L8L6 764 aaKnown RBP12.01□□□□□ -0.49
NEK3-203ENST00000551355 ADGRF4Q8IZF3 695 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
NEK3-203ENST00000551355 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
NEK3-203ENST00000551355 PROCA1Q8NCQ7 364 aaPredicted RBP12.01□□□□□ -0.49
NEK3-203ENST00000551355 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms