RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
SCN8A-206ENST00000550891 KRBA2Q6ZNG9 492 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 PDILTQ8N807 584 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 BARHL2Q9NY43 387 aa17.73■□□□□ 0.43
SCN8A-206ENST00000550891 FAM237AA0A1B0GTK4 181 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 POLR2DO15514 142 aaKnown RBP17.72■□□□□ 0.43
SCN8A-206ENST00000550891 ASPRV1Q53RT3 343 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 MCM7P33993 719 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 WWC2Q6AWC2 1192 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 FAM177A1Q8N128 213 aaPredicted RBP17.72■□□□□ 0.43
SCN8A-206ENST00000550891 C6orf50Q9HD87 102 aa17.72■□□□□ 0.43
SCN8A-206ENST00000550891 A0A087WWV3 80 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 CYTH3O43739 400 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 VEGFAP15692 232 aaPredicted RBP17.71■□□□□ 0.43
SCN8A-206ENST00000550891 GNA11P29992 359 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 CLCN1P35523 988 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 SPC24Q8NBT2 197 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 FBXO41Q8TF61 875 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 EHD4Q9H223 541 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 CPVLQ9H3G5 476 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 HDAC9Q9UKV0 1011 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 ZKSCAN5Q9Y2L8 839 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 FRMPD2Q68DX3 1309 aaPredicted RBP17.71■□□□□ 0.43
SCN8A-206ENST00000550891 PLIN4Q96Q06 1357 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 USP17L5A8MUK1 530 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 NLRP12P59046 1061 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 PTGDRQ13258 359 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 NPY5RQ15761 445 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 CCDC96Q2M329 555 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 LONRF3Q496Y0 759 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 TNFRSF25Q93038 417 aa17.71■□□□□ 0.43
SCN8A-206ENST00000550891 SMARCA1P28370 1054 aa17.71■□□□□ 0.42
SCN8A-206ENST00000550891 AOPEPQ8N6M6 819 aa17.71■□□□□ 0.42
SCN8A-206ENST00000550891 DDX60LQ5H9U9 1706 aaKnown RBP17.7■□□□□ 0.42
SCN8A-206ENST00000550891 VWA3AA6NCI4 1184 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 TPM3P06753 285 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 PDHBP11177 359 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 SHMT1P34896 483 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 GRIN1Q05586 938 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 PNOCQ13519 176 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 CFAP100Q494V2 611 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 UBA5Q9GZZ9 404 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 DPEP1P16444 411 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 DPCR1Q3MIW9 517 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 ISM2Q6H9L7 571 aa17.7■□□□□ 0.42
SCN8A-206ENST00000550891 TDRD3Q9H7E2 651 aaKnown RBP17.7■□□□□ 0.42
SCN8A-206ENST00000550891 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
SCN8A-206ENST00000550891 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 PCDHAC2Q9Y5I4 1007 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 SMTNL1A8MU46 457 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 STXBP3O00186 592 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 IQCB1Q15051 598 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 NOM1Q5C9Z4 860 aaKnown RBP17.69■□□□□ 0.42
SCN8A-206ENST00000550891 RASGRP4Q8TDF6 673 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 C10orf71Q711Q0 1435 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 TXLNAP40222 546 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 CLEC10AQ8IUN9 316 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 PIGSQ96S52 555 aa17.69■□□□□ 0.42
SCN8A-206ENST00000550891 MORC2Q9Y6X9 1032 aaPredicted RBP17.69■□□□□ 0.42
SCN8A-206ENST00000550891 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 RAD17O75943 681 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-206ENST00000550891 ZFPM1Q8IX07 1006 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 DHX58Q96C10 678 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 ZNF277Q9NRM2 450 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-206ENST00000550891 QSER1Q2KHR3 1735 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 POLD1P28340 1107 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 ATP2C1P98194 919 aaPredicted RBP17.68■□□□□ 0.42
SCN8A-206ENST00000550891 POSTNQ15063 836 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 PSMD1Q99460 953 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 SERTAD1Q9UHV2 236 aa17.68■□□□□ 0.42
SCN8A-206ENST00000550891 NOVP48745 357 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 KRT25Q7Z3Z0 450 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 DAGLBQ8NCG7 672 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 RASSF8Q8NHQ8 419 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 SMARCE1Q969G3 411 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 PPP1R1BQ9UD71 204 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 FAM196BA6NMK8 535 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 hCG_1984214I3L0E3 225 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 AP5Z1O43299 807 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 NIM1KQ8IY84 436 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 ZNF713Q8N859 430 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 PYM1Q9BRP8 204 aaKnown RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 FAM198AQ9UFP1 575 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 SMC2O95347 1197 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 ZNF75DP51815 510 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 DLGAP5Q15398 846 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 SYMPKQ92797 1274 aaKnown RBP17.67■□□□□ 0.42
SCN8A-206ENST00000550891 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
SCN8A-206ENST00000550891 PCDHA5Q9Y5H7 936 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms