RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 KIF5BP33176 963 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
CACNB3-216ENST00000550391 GRM4Q14833 912 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
CACNB3-216ENST00000550391 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 TMX2Q9Y320 296 aa16.43■□□□□ 0.22
CACNB3-216ENST00000550391 CDKL5O76039 1030 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 PDHBP11177 359 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 GNAQP50148 359 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 HUNKP57058 714 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 VGLL4Q14135 290 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 NTRK3Q16288 839 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 ARMC9Q7Z3E5 817 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 CCDC84Q86UT8 332 aaPredicted RBP16.42■□□□□ 0.22
CACNB3-216ENST00000550391 NSUN7Q8NE18 718 aaKnown RBP16.42■□□□□ 0.22
CACNB3-216ENST00000550391 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 SMARCC2Q8TAQ2 1214 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 ACER1Q8TDN7 264 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 SNCAIPQ9Y6H5 919 aa16.42■□□□□ 0.22
CACNB3-216ENST00000550391 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-216ENST00000550391 TTLL12Q14166 644 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-216ENST00000550391 MOB2Q70IA6 237 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-216ENST00000550391 ANKRD13AQ8IZ07 590 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 SLC17A8Q8NDX2 589 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
CACNB3-216ENST00000550391 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 F5H6K3 240 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 JAK2O60674 1132 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
CACNB3-216ENST00000550391 IFNAR1P17181 557 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 FKBP1BP68106 108 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
CACNB3-216ENST00000550391 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
CACNB3-216ENST00000550391 KLRC3Q07444 240 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 SLFN13Q68D06 897 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 TMTC3Q6ZXV5 915 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 LZTS2Q9BRK4 669 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 CSADQ9Y600 493 aa16.4■□□□□ 0.22
CACNB3-216ENST00000550391 MKI67P46013 3256 aaKnown RBP16.4■□□□□ 0.22
CACNB3-216ENST00000550391 UNCXA6NJT0 531 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 FAM155AB1AL88 458 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-216ENST00000550391 DTNBO60941 627 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 GJB2P29033 226 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 DDIT3P35638 169 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 FUT2Q10981 343 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 LDLRAD1Q5T700 205 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 KIAA1683Q9H0B3 1180 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 VCPKMTQ9H867 229 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 GOPCQ9HD26 462 aa16.39■□□□□ 0.21
CACNB3-216ENST00000550391 NDUFB10O96000 172 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 KIAA1755Q5JYT7 1200 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 FEZ1Q99689 392 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 GBA2Q9HCG7 927 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 ORC3Q9UBD5 711 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-216ENST00000550391 KIF3AQ9Y496 699 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 ZHX2Q9Y6X8 837 aa16.38■□□□□ 0.21
CACNB3-216ENST00000550391 USP17L10C9JJH3 530 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 KLRF2D3W0D1 207 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 RAD21O60216 631 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-216ENST00000550391 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 SLC1A4P43007 532 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 SPP2Q13103 211 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
CACNB3-216ENST00000550391 FAM184AQ8NB25 1140 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 PHKBQ93100 1093 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 CLMNQ96JQ2 1002 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 ELP3Q9H9T3 547 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 AFG3L2Q9Y4W6 797 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 FRMPD2Q68DX3 1309 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-216ENST00000550391 CNTNAP5Q8WYK1 1306 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 STK36Q9NRP7 1315 aa16.37■□□□□ 0.21
CACNB3-216ENST00000550391 SPDYE5A6NIY4 337 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms