RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 BTG4Q9NY30 223 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 ANAPC4Q9UJX5 808 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 NHSL1Q5SYE7 1610 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 ITIH6Q6UXX5 1313 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 HSPA2P54652 639 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 TMTC3Q6ZXV5 915 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 HDXQ7Z353 690 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 HNRNPLLQ8WVV9 542 aaKnown RBP15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 FECHP22830 423 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 USP5P45974 858 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 UBXN1Q04323 297 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 FAM47AQ5JRC9 791 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CYP26C1Q6V0L0 522 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CCDC51Q96ER9 411 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 RWDD2AQ9UIY3 292 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 GUCA1BQ9UMX6 200 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 L1RE1Q9UN81 338 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CNTNAP5Q8WYK1 1306 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CICQ96RK0 1608 aaPredicted RBP15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 BCL9LQ86UU0 1499 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE15A4D2H0 777 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 ENC1O14682 589 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE8P0CG41 777 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 PRCPP42785 496 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 NLRP5P59047 1200 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 PPP2R5BQ15173 497 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE6Q86UF2 777 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 IQCA1Q86XH1 822 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE4Q8IX94 777 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 HDAC6Q9UBN7 1215 aa15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 REXO2Q9Y3B8 237 aaKnown RBP15.96■□□□□ 0.15
RAPGEF3-218ENST00000548919 LRRC10BA6NIK2 292 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 PHACTR2O75167 634 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 BMP15O95972 392 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 SLAIN2Q9P270 581 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 COL1A1P02452 1464 aaPredicted RBP15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 MYH13Q9UKX3 1938 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 DUOX1Q9NRD9 1551 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 USP17L12C9JPN9 530 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 USP17L21D6R901 530 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 EXOC4Q96A65 974 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 EEF2KMTQ96G04 330 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 AK7Q96M32 723 aa15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 RBM28Q9NW13 759 aaKnown RBP15.95■□□□□ 0.14
RAPGEF3-218ENST00000548919 RPN1P04843 607 aaKnown RBP15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 CTR9Q6PD62 1173 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 MYO6Q9UM54 1294 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 FAN1Q9Y2M0 1017 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 TTC26A0AVF1 554 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 GTPBP6O43824 516 aaPredicted RBP15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 PMS1P54277 932 aaKnown RBP15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 ZNF658Q5TYW1 1059 aaPredicted RBP15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 IRF2BP1Q8IU81 584 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 PLIN2Q99541 437 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 LCMT1Q9UIC8 334 aa15.94■□□□□ 0.14
RAPGEF3-218ENST00000548919 ERLIN1O75477 346 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 EIF5P55010 431 aaKnown RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 AMPD2Q01433 879 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 CASP8Q14790 479 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 MUM1L1Q5H9M0 696 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 RASGRP4Q8TDF6 673 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 BBXQ8WY36 941 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 ABCA3Q99758 1704 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 PP2D1A8MPX8 630 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 NDUFA10O95299 355 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 WHAMMP3Q1A5X7 153 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 INTS5Q6P9B9 1019 aaKnown RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 EPN1Q9Y6I3 576 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 TAF1P21675 1872 aa15.93■□□□□ 0.14
RAPGEF3-218ENST00000548919 LRRIQ3A6PVS8 624 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 SRGAP2O75044 1071 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 PARP1P09874 1014 aaKnown RBP15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 SCG2P13521 617 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 GTF2E1P29083 439 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 ANKRD20A12PQ8NF67 263 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CTCFLQ8NI51 663 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 GPKOWQ92917 476 aaPredicted RBP eCLIP15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CYP2D6P10635 497 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 PIP4K2BP78356 416 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 TUBB2AQ13885 445 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 TUBB2BQ9BVA1 445 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 FAM205AQ6ZU69 1335 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CALM1P0DP23 149 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CALM2P0DP24 149 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 CALM3P0DP25 149 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 STAT6P42226 847 aa15.92■□□□□ 0.14
RAPGEF3-218ENST00000548919 SPAG1Q07617 926 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms