RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 KIF6Q6ZMV9 814 aa26■■□□□ 1.75
NPAS3-206ENST00000548645 UBAC1Q9BSL1 405 aa26■■□□□ 1.75
NPAS3-206ENST00000548645 PHF20Q9BVI0 1012 aa26■■□□□ 1.75
NPAS3-206ENST00000548645 BLZF1Q9H2G9 400 aa26■■□□□ 1.75
NPAS3-206ENST00000548645 RNF41Q9H4P4 317 aaPredicted RBP26■■□□□ 1.75
NPAS3-206ENST00000548645 LUC7L2Q9Y383 392 aaKnown RBP26■■□□□ 1.75
NPAS3-206ENST00000548645 A0A087WUV0 522 aaPredicted RBP26■■□□□ 1.75
NPAS3-206ENST00000548645 ANKRD65E5RJM6 399 aa26■■□□□ 1.75
NPAS3-206ENST00000548645 EARS2Q5JPH6 523 aaKnown RBP26■■□□□ 1.75
NPAS3-206ENST00000548645 PROSER2Q86WR7 435 aaPredicted RBP26■■□□□ 1.75
NPAS3-206ENST00000548645 GTPBP6O43824 516 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-206ENST00000548645 GNAT2P19087 354 aa25.99■■□□□ 1.75
NPAS3-206ENST00000548645 KRT83P78385 493 aa25.99■■□□□ 1.75
NPAS3-206ENST00000548645 RMND1Q9NWS8 449 aa25.99■■□□□ 1.75
NPAS3-206ENST00000548645 SHOX2O60902 331 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-206ENST00000548645 GGCXP38435 758 aa25.99■■□□□ 1.75
NPAS3-206ENST00000548645 IQSEC3Q9UPP2 1182 aaPredicted RBP25.99■■□□□ 1.75
NPAS3-206ENST00000548645 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 TTC26A0AVF1 554 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 ZNF174Q15697 407 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 E2F4Q16254 413 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 ZNF658Q5TYW1 1059 aaPredicted RBP25.98■■□□□ 1.75
NPAS3-206ENST00000548645 ZNF662Q6ZS27 426 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 TADA2BQ86TJ2 420 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 FAM76AQ8TAV0 307 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 DNAJC7Q99615 494 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 SPATA5Q8NB90 893 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 SHISA4Q96DD7 197 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 RTL9Q8NET4 1388 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 H7C1D1 291 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 KRT86O43790 486 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 JAKMIP2Q96AA8 810 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 CAPZA3Q96KX2 299 aa25.98■■□□□ 1.75
NPAS3-206ENST00000548645 C1orf167Q5SNV9 1468 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 SRGAP2O75044 1071 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 TTC38Q5R3I4 469 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 CERS3Q8IU89 383 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 RIN2Q8WYP3 895 aaPredicted RBP25.97■■□□□ 1.75
NPAS3-206ENST00000548645 PRKAB2O43741 272 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 GUCY2CP25092 1073 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 HERVK_113P62684 666 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 PKN1Q16512 942 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 CCNI2Q6ZMN8 369 aaPredicted RBP25.97■■□□□ 1.75
NPAS3-206ENST00000548645 KIAA1328Q86T90 577 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 CAGE1Q8TC20 777 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 SELENOOQ9BVL4 669 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 SLC4A4Q9Y6R1 1079 aa25.97■■□□□ 1.75
NPAS3-206ENST00000548645 A0A1W2PQC6 194 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 CTSWP56202 376 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 ATP2C1P98194 919 aaPredicted RBP25.96■■□□□ 1.75
NPAS3-206ENST00000548645 IQCEQ6IPM2 695 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 SYNE4Q8N205 404 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 MB21D1Q8N884 522 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 PTGDRQ13258 359 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 PDXDC2PQ6P474 469 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 ZCRB1Q8TBF4 217 aaKnown RBP25.96■■□□□ 1.75
NPAS3-206ENST00000548645 LPIN2Q92539 896 aa25.96■■□□□ 1.75
NPAS3-206ENST00000548645 PUM3Q15397 648 aaKnown RBP25.95■■□□□ 1.75
NPAS3-206ENST00000548645 CCDC70Q6NSX1 233 aa25.95■■□□□ 1.75
NPAS3-206ENST00000548645 DEF6Q9H4E7 631 aa25.95■■□□□ 1.75
NPAS3-206ENST00000548645 CAPN11Q9UMQ6 739 aa25.95■■□□□ 1.75
NPAS3-206ENST00000548645 MYH6P13533 1939 aa25.95■■□□□ 1.75
NPAS3-206ENST00000548645 TNS3Q68CZ2 1445 aa25.95■■□□□ 1.74
NPAS3-206ENST00000548645 GOLGA6CA6NDK9 693 aa25.95■■□□□ 1.74
NPAS3-206ENST00000548645 PRPF3O43395 683 aaKnown RBP25.95■■□□□ 1.74
NPAS3-206ENST00000548645 PARP1P09874 1014 aaKnown RBP25.95■■□□□ 1.74
NPAS3-206ENST00000548645 GOLGA6DP0CG33 693 aa25.95■■□□□ 1.74
NPAS3-206ENST00000548645 GOLGA6AQ9NYA3 693 aa25.95■■□□□ 1.74
NPAS3-206ENST00000548645 WNT7AO00755 349 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 GDAP1L1Q96MZ0 367 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 ANO9A1A5B4 782 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 LGALS16A8MUM7 142 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 PNPLA7Q6ZV29 1317 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 GOLGA6BA6NDN3 693 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 AGPSO00116 658 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 ZMYND10O75800 440 aa25.94■■□□□ 1.74
NPAS3-206ENST00000548645 RPN1P04843 607 aaKnown RBP25.94■■□□□ 1.74
NPAS3-206ENST00000548645 CYLC1P35663 651 aaPredicted RBP25.94■■□□□ 1.74
NPAS3-206ENST00000548645 PRDM1O75626 825 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 IPO7O95373 1038 aaKnown RBP25.93■■□□□ 1.74
NPAS3-206ENST00000548645 LCORLQ8N3X6 602 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 CABLES1Q8TDN4 633 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 GNL3LQ9NVN8 582 aaKnown RBP25.93■■□□□ 1.74
NPAS3-206ENST00000548645 WDR59Q6PJI9 974 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 SUGP1Q8IWZ8 645 aaKnown RBP25.93■■□□□ 1.74
NPAS3-206ENST00000548645 MICALL1Q8N3F8 863 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 MTRQ99707 1265 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 TNKSO95271 1327 aa25.93■■□□□ 1.74
NPAS3-206ENST00000548645 PRCPP42785 496 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 SEC23AQ15436 765 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 KAT14Q9H8E8 782 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 FAM184BQ9ULE4 1060 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 V9GY48 417 aaPredicted RBP25.92■■□□□ 1.74
NPAS3-206ENST00000548645 PES1O00541 588 aaKnown RBP25.92■■□□□ 1.74
NPAS3-206ENST00000548645 EBAG9O00559 213 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 EEF1GP26641 437 aaKnown RBP25.92■■□□□ 1.74
NPAS3-206ENST00000548645 IRAK1P51617 712 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 PPFIA1Q13136 1202 aa25.92■■□□□ 1.74
NPAS3-206ENST00000548645 SKIDA1Q1XH10 827 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms