RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 FRMPD2Q68DX3 1309 aaPredicted RBP33.44■■■□□ 2.94
BRF1-213ENST00000548421 DTNBO60941 627 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 USP14P54578 494 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 ZYXQ15942 572 aaKnown RBP33.44■■■□□ 2.94
BRF1-213ENST00000548421 ERO1BQ86YB8 467 aa33.44■■■□□ 2.94
BRF1-213ENST00000548421 CMTR1Q8N1G2 835 aaKnown RBP33.44■■■□□ 2.94
BRF1-213ENST00000548421 KLRF2D3W0D1 207 aa33.43■■■□□ 2.94
BRF1-213ENST00000548421 MTMR2Q13614 643 aa33.43■■■□□ 2.94
BRF1-213ENST00000548421 SRBD1Q8N5C6 995 aaKnown RBP33.43■■■□□ 2.94
BRF1-213ENST00000548421 PHKBQ93100 1093 aa33.43■■■□□ 2.94
BRF1-213ENST00000548421 AFG3L2Q9Y4W6 797 aa33.43■■■□□ 2.94
BRF1-213ENST00000548421 PTPRFP10586 1907 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 BACE1P56817 501 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 FUT2Q10981 343 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 NBPF11Q86T75 865 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 SPICE1Q8N0Z3 855 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 CCDC82Q8N4S0 544 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 LPAR1Q92633 364 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 DDX11Q96FC9 970 aa33.42■■■□□ 2.94
BRF1-213ENST00000548421 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.42■■■□□ 2.94
BRF1-213ENST00000548421 PASKQ96RG2 1323 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 STK36Q9NRP7 1315 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 SPDYE5A6NIY4 337 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 TRIM75PA6NK02 468 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 PPFIA3O75145 1194 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 FMNL1O95466 1100 aaPredicted RBP33.41■■■□□ 2.94
BRF1-213ENST00000548421 PPATQ06203 517 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 SSRP1Q08945 709 aaKnown RBP33.41■■■□□ 2.94
BRF1-213ENST00000548421 KIAA1755Q5JYT7 1200 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 CST9Q5W186 159 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 KCTD1Q719H9 257 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 TRIM22Q8IYM9 498 aa33.41■■■□□ 2.94
BRF1-213ENST00000548421 CNTNAP5Q8WYK1 1306 aa33.4■■■□□ 2.94
BRF1-213ENST00000548421 BMP3P12645 472 aa33.4■■■□□ 2.94
BRF1-213ENST00000548421 RBM46Q8TBY0 533 aaKnown RBP33.4■■■□□ 2.94
BRF1-213ENST00000548421 SLC26A6Q9BXS9 759 aa33.4■■■□□ 2.94
BRF1-213ENST00000548421 RNF26Q9BY78 433 aaPredicted RBP33.4■■■□□ 2.94
BRF1-213ENST00000548421 GPCPD1Q9NPB8 672 aa33.4■■■□□ 2.94
BRF1-213ENST00000548421 ISY1Q9ULR0 285 aaKnown RBP33.4■■■□□ 2.94
BRF1-213ENST00000548421 KIF3AQ9Y496 699 aa33.4■■■□□ 2.94
BRF1-213ENST00000548421 BAZ2BQ9UIF8 2168 aaKnown RBP33.4■■■□□ 2.94
BRF1-213ENST00000548421 C19orf81C9J6K1 198 aa33.39■■■□□ 2.94
BRF1-213ENST00000548421 TOMM70O94826 608 aa33.39■■■□□ 2.94
BRF1-213ENST00000548421 SMARCA1P28370 1054 aa33.39■■■□□ 2.94
BRF1-213ENST00000548421 FAM184AQ8NB25 1140 aa33.39■■■□□ 2.94
BRF1-213ENST00000548421 NUP88Q99567 741 aaPredicted RBP33.39■■■□□ 2.94
BRF1-213ENST00000548421 SPZ1Q9BXG8 430 aa33.39■■■□□ 2.94
BRF1-213ENST00000548421 ORC3Q9UBD5 711 aaPredicted RBP33.39■■■□□ 2.94
BRF1-213ENST00000548421 FDPSP14324 419 aaKnown RBP33.38■■■□□ 2.93
BRF1-213ENST00000548421 ZNF784Q8NCA9 323 aaPredicted RBP33.38■■■□□ 2.93
BRF1-213ENST00000548421 CNKSR2Q8WXI2 1034 aa33.38■■■□□ 2.93
BRF1-213ENST00000548421 DDIT3P35638 169 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 OTUD5Q96G74 571 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 AKAP17AQ02040 695 aaKnown RBP33.37■■■□□ 2.93
BRF1-213ENST00000548421 PPIL2Q13356 520 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 FAM83BQ5T0W9 1011 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 SLC10A4Q96EP9 437 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 EMILIN3Q9NT22 766 aa33.37■■■□□ 2.93
BRF1-213ENST00000548421 WDR46O15213 610 aaKnown RBP33.36■■■□□ 2.93
BRF1-213ENST00000548421 PRPF3O43395 683 aaKnown RBP33.36■■■□□ 2.93
BRF1-213ENST00000548421 TTBK2Q6IQ55 1244 aa33.36■■■□□ 2.93
BRF1-213ENST00000548421 OPTNQ96CV9 577 aa33.36■■■□□ 2.93
BRF1-213ENST00000548421 C12orf42Q96LP6 360 aa33.36■■■□□ 2.93
BRF1-213ENST00000548421 RBM27Q9P2N5 1060 aaKnown RBP33.36■■■□□ 2.93
BRF1-213ENST00000548421 CYTH3O43739 400 aa33.35■■■□□ 2.93
BRF1-213ENST00000548421 SLC35G1Q2M3R5 365 aa33.35■■■□□ 2.93
BRF1-213ENST00000548421 UBA5Q9GZZ9 404 aa33.35■■■□□ 2.93
BRF1-213ENST00000548421 CPVLQ9H3G5 476 aa33.35■■■□□ 2.93
BRF1-213ENST00000548421 RIOX1Q9H6W3 641 aa33.35■■■□□ 2.93
BRF1-213ENST00000548421 DEXIO95424 95 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 PDCP20941 246 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 HMGCS2P54868 508 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 SH3D19Q5HYK7 790 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 WASF1Q92558 559 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 V9GY48 417 aaPredicted RBP33.34■■■□□ 2.93
BRF1-213ENST00000548421 LOC285556D6RIA3 1793 aa33.34■■■□□ 2.93
BRF1-213ENST00000548421 TMEM232C9JQI7 657 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 CXCL11O14625 94 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 IRF6O14896 467 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 VCAM1P19320 739 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 DGKZQ13574 1117 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 TMOD4Q9NZQ9 345 aa33.33■■■□□ 2.93
BRF1-213ENST00000548421 STAT2P52630 851 aa33.32■■■□□ 2.92
BRF1-213ENST00000548421 BTNL9Q6UXG8 535 aa33.32■■■□□ 2.92
BRF1-213ENST00000548421 CIZ1Q9ULV3 898 aaPredicted RBP33.32■■■□□ 2.92
BRF1-213ENST00000548421 KCNH4Q9UQ05 1017 aa33.32■■■□□ 2.92
BRF1-213ENST00000548421 SLC16A2P36021 539 aa33.31■■■□□ 2.92
BRF1-213ENST00000548421 IKQ13123 557 aaPredicted RBP33.31■■■□□ 2.92
BRF1-213ENST00000548421 LARP1BQ659C4 914 aaKnown RBP33.31■■■□□ 2.92
BRF1-213ENST00000548421 PLA2G6O60733 806 aa33.31■■■□□ 2.92
BRF1-213ENST00000548421 HUNKP57058 714 aa33.31■■■□□ 2.92
BRF1-213ENST00000548421 ADGRF4Q8IZF3 695 aa33.31■■■□□ 2.92
BRF1-213ENST00000548421 RRP36Q96EU6 259 aaKnown RBP33.31■■■□□ 2.92
BRF1-213ENST00000548421 FEM1BQ9UK73 627 aa33.31■■■□□ 2.92
BRF1-213ENST00000548421 A0A0G2JLL6 359 aaPredicted RBP33.3■■■□□ 2.92
BRF1-213ENST00000548421 hCG_1642624A0A1W2PR95 340 aa33.3■■■□□ 2.92
BRF1-213ENST00000548421 SYT1P21579 422 aa33.3■■■□□ 2.92
BRF1-213ENST00000548421 FSTL1Q12841 308 aa33.3■■■□□ 2.92
BRF1-213ENST00000548421 PRRT2Q7Z6L0 340 aaPredicted RBP33.3■■■□□ 2.92
BRF1-213ENST00000548421 CHURC1Q8WUH1 139 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms