RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 PIWIL2Q8TC59 973 aaKnown RBP9.08□□□□□ -0.96
NPAS3-204ENST00000546849 FGD4Q96M96 766 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
NPAS3-204ENST00000546849 KRTAP9-2Q9BYQ4 174 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 TRIT1Q9H3H1 467 aaKnown RBP9.08□□□□□ -0.96
NPAS3-204ENST00000546849 PIF1Q9H611 641 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 WHRNQ9P202 907 aa9.08□□□□□ -0.96
NPAS3-204ENST00000546849 NOP56O00567 594 aaKnown RBP9.07□□□□□ -0.96
NPAS3-204ENST00000546849 CEACAM5P06731 702 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 ZNF865P0CJ78 1059 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-204ENST00000546849 CDKAL1Q5VV42 579 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 MRM1Q6IN84 353 aaKnown RBP9.07□□□□□ -0.96
NPAS3-204ENST00000546849 CRACR2BQ8N4Y2 399 aaPredicted RBP9.07□□□□□ -0.96
NPAS3-204ENST00000546849 DTWD2Q8NBA8 298 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 MKNK2Q9HBH9 465 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 GPATCH2Q9NW75 528 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 PFDN2Q9UHV9 154 aa9.07□□□□□ -0.96
NPAS3-204ENST00000546849 FAM221BA6H8Z2 402 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 CD247P20963 164 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 GRIK1P39086 918 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 SSRP1Q08945 709 aaKnown RBP9.06□□□□□ -0.96
NPAS3-204ENST00000546849 NMIQ13287 307 aaPredicted RBP9.06□□□□□ -0.96
NPAS3-204ENST00000546849 ADCY4Q8NFM4 1077 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 PRDM14Q9GZV8 571 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 GP6Q9HCN6 339 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 GFOD1Q9NXC2 390 aa9.06□□□□□ -0.96
NPAS3-204ENST00000546849 PRR33A8MZF0 331 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 TNK2Q07912 1038 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 ANKRD39Q53RE8 183 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 POMZP3Q6PJE2 187 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 FAM214BQ7L5A3 538 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
NPAS3-204ENST00000546849 NETO1Q8TDF5 533 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 VWCEQ96DN2 955 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 KLHL25Q9H0H3 589 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 ZNF451Q9Y4E5 1061 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 CAPN6Q9Y6Q1 641 aa9.05□□□□□ -0.96
NPAS3-204ENST00000546849 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 OXCT1P55809 520 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 IFI16Q16666 785 aaKnown RBP9.04□□□□□ -0.96
NPAS3-204ENST00000546849 SLC10A6Q3KNW5 377 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 CWF19L1Q69YN2 538 aaKnown RBP9.04□□□□□ -0.96
NPAS3-204ENST00000546849 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 Q96M66 194 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 NOL6Q9H6R4 1146 aaKnown RBP9.04□□□□□ -0.96
NPAS3-204ENST00000546849 CHST7Q9NS84 486 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 CNTNAP4Q9C0A0 1308 aa9.04□□□□□ -0.96
NPAS3-204ENST00000546849 TMEM265A0A087WTH1 108 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 SSU72P8A0A1W2PR75 194 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 MEIS1O00470 390 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 FOSL1P15407 271 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 CLCN7P51798 805 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 SNW1Q13573 536 aaKnown RBP9.03□□□□□ -0.96
NPAS3-204ENST00000546849 PPP2R5DQ14738 602 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 TMC3Q7Z5M5 1100 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 LRRN4CLQ8ND94 238 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 BRF1Q92994 677 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 ZNF669Q96BR6 464 aaPredicted RBP9.03□□□□□ -0.96
NPAS3-204ENST00000546849 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 AKT3Q9Y243 479 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 SF3B6Q9Y3B4 125 aaKnown RBP9.03□□□□□ -0.96
NPAS3-204ENST00000546849 FHOD1Q9Y613 1164 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 KDM2BQ8NHM5 1336 aa9.03□□□□□ -0.96
NPAS3-204ENST00000546849 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.96
NPAS3-204ENST00000546849 KRTAP9-6A0A140TA67 174 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 H3BS24 57 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 SIGLEC6O43699 453 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 LRP8Q14114 963 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 FIBCD1Q8N539 461 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.97
NPAS3-204ENST00000546849 ZSWIM5Q9P217 1185 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.97
NPAS3-204ENST00000546849 HYAL3O43820 417 aaPredicted RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 SMARCA5O60264 1052 aaPredicted RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 PRAMEF1O95521 474 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 TGFB1P01137 390 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 ZNF445P59923 1031 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 GIMAP6Q6P9H5 292 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 SPATC1Q76KD6 591 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 PLD6Q8N2A8 252 aaKnown RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 BVESQ8NE79 360 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 ENOX1Q8TC92 643 aaKnown RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 ZDHHC15Q96MV8 337 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 GPR62Q9BZJ7 368 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 APEX2Q9UBZ4 518 aa9.01□□□□□ -0.97
NPAS3-204ENST00000546849 DIS3Q9Y2L1 958 aaKnown RBP9.01□□□□□ -0.97
NPAS3-204ENST00000546849 A0A087WZG4 1122 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 SHOXO15266 292 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 LTKP29376 864 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 SPACA3Q8IXA5 215 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 SGSM3Q96HU1 749 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 HRASLS5Q96KN8 279 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 HSPA12BQ96MM6 686 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 SPATA9Q9BWV2 254 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 SUSD2Q9UGT4 822 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 ZMYM5Q9UJ78 669 aa9□□□□□ -0.97
NPAS3-204ENST00000546849 HSP90AA2PQ14568 343 aaPredicted RBP8.99□□□□□ -0.97
NPAS3-204ENST00000546849 NKPD1Q17RQ9 610 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms