RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
CPNE8-204ENST00000546603 PCDHB12Q9Y5F1 795 aa9.4□□□□□ -0.9
CPNE8-204ENST00000546603 FAM86C2PA6NEL3 165 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 SIGLEC6O43699 453 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 ERCC5P28715 1186 aaPredicted RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 PMS1P54277 932 aaKnown RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 SNW1Q13573 536 aaKnown RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 RNF111Q6ZNA4 994 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 SMARCC1Q92922 1105 aaPredicted RBP9.39□□□□□ -0.91
CPNE8-204ENST00000546603 KIRREL1Q96J84 757 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 FBXL21Q9UKT6 434 aa9.39□□□□□ -0.91
CPNE8-204ENST00000546603 GIPRP48546 466 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 NASPP49321 788 aaPredicted RBP9.38□□□□□ -0.91
CPNE8-204ENST00000546603 HK2P52789 917 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 BBS9Q3SYG4 887 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 UNC5AQ6ZN44 842 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 CCDC144CPQ8IYA2 1237 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 TCTN2Q96GX1 697 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 PRR13Q9NZ81 148 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CPNE8-204ENST00000546603 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 PRAMEF1O95521 474 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 PCBP3P57721 371 aaKnown RBP9.37□□□□□ -0.91
CPNE8-204ENST00000546603 TEKQ02763 1124 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 FYB2Q5VWT5 728 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 USHBP1Q8N6Y0 703 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
CPNE8-204ENST00000546603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
CPNE8-204ENST00000546603 ZGLP1P0C6A0 271 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
CPNE8-204ENST00000546603 TMEM67Q5HYA8 995 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 C7orf61Q8IZ16 206 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 OXR1Q8N573 874 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 C19orf47Q8N9M1 422 aaKnown RBP9.36□□□□□ -0.91
CPNE8-204ENST00000546603 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 PDZD8Q8NEN9 1154 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
CPNE8-204ENST00000546603 C9IYK1 514 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 HPXP02790 462 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 GLI1P08151 1106 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 DUSP4Q13115 394 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 ANKRD39Q53RE8 183 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 MYLIPQ8WY64 445 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 TCFL5Q9UL49 500 aa9.35□□□□□ -0.91
CPNE8-204ENST00000546603 SPPL2CQ8IUH8 684 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 ABHD4Q8TB40 342 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 SHDQ96IW2 340 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 FOXP3Q9BZS1 431 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 CAPN10Q9HC96 672 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 GFOD1Q9NXC2 390 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
CPNE8-204ENST00000546603 ZNF281Q9Y2X9 895 aa9.34□□□□□ -0.91
CPNE8-204ENST00000546603 FITM1A5D6W6 292 aa9.33□□□□□ -0.92
CPNE8-204ENST00000546603 SYPP08247 313 aa9.33□□□□□ -0.92
CPNE8-204ENST00000546603 RPL10P27635 214 aaKnown RBP9.33□□□□□ -0.92
CPNE8-204ENST00000546603 GNL2Q13823 731 aaKnown RBP9.33□□□□□ -0.92
CPNE8-204ENST00000546603 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
CPNE8-204ENST00000546603 OGFOD2Q6N063 350 aa9.33□□□□□ -0.92
CPNE8-204ENST00000546603 ZNF503-AS2A6NEH8 195 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 TP53P04637 393 aaPredicted RBP9.32□□□□□ -0.92
CPNE8-204ENST00000546603 ATF4P18848 351 aaPredicted RBP9.32□□□□□ -0.92
CPNE8-204ENST00000546603 ERVFC1P60507 584 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 CHRNEQ04844 493 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 AXDND1Q5T1B0 1012 aaPredicted RBP9.32□□□□□ -0.92
CPNE8-204ENST00000546603 PPFIBP1Q86W92 1011 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 LILRA2Q8N149 483 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 POU5F2Q8N7G0 328 aa9.32□□□□□ -0.92
CPNE8-204ENST00000546603 PHAXQ9H814 394 aaKnown RBP9.32□□□□□ -0.92
CPNE8-204ENST00000546603 LTBP3Q9NS15 1303 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 A0A1W2PQH9 124 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 E9PSI1 815 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 ENDOUP21128 410 aaKnown RBP9.31□□□□□ -0.92
CPNE8-204ENST00000546603 NR0B2Q15466 257 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 NOL9Q5SY16 702 aaKnown RBP9.31□□□□□ -0.92
CPNE8-204ENST00000546603 WAPLQ7Z5K2 1190 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 ANKS4BQ8N8V4 417 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 LINC01599Q8WXQ3 324 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 DSCC1Q9BVC3 393 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 ZMYM5Q9UJ78 669 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 MINPP1Q9UNW1 487 aa9.31□□□□□ -0.92
CPNE8-204ENST00000546603 MEIS1O00470 390 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 SHOXO15266 292 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 GSNP06396 782 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 BMP8BP34820 402 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 CASP7P55210 303 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 PPP2R5EQ16537 467 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 DCAF15Q66K64 600 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 MPZL3Q6UWV2 235 aa9.3□□□□□ -0.92
CPNE8-204ENST00000546603 LRRC10BA6NIK2 292 aa9.29□□□□□ -0.92
CPNE8-204ENST00000546603 CD247P20963 164 aa9.29□□□□□ -0.92
CPNE8-204ENST00000546603 TCEAL1Q15170 157 aa9.29□□□□□ -0.92
CPNE8-204ENST00000546603 GNPTABQ3T906 1256 aa9.29□□□□□ -0.92
CPNE8-204ENST00000546603 LIN37Q96GY3 246 aaPredicted RBP9.29□□□□□ -0.92
CPNE8-204ENST00000546603 SP110Q9HB58 689 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms