RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ZNRF3Q9ULT6 936 aa8.2□□□□□ -1.1
SNHG1-224ENST00000545688 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
SNHG1-224ENST00000545688 OXR1Q8N573 874 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 USHBP1Q8N6Y0 703 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 DAGLBQ8NCG7 672 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 SYTL4Q96C24 671 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-224ENST00000545688 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 SLC6A18Q96N87 628 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 SLC9A7Q96T83 725 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 FOXP3Q9BZS1 431 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 ZNF281Q9Y2X9 895 aa8.19□□□□□ -1.1
SNHG1-224ENST00000545688 FITM1A5D6W6 292 aa8.18□□□□□ -1.1
SNHG1-224ENST00000545688 PRAMEF1O95521 474 aa8.18□□□□□ -1.1
SNHG1-224ENST00000545688 RNF111Q6ZNA4 994 aa8.18□□□□□ -1.1
SNHG1-224ENST00000545688 SYDE1Q6ZW31 735 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-224ENST00000545688 PRDM14Q9GZV8 571 aa8.18□□□□□ -1.1
SNHG1-224ENST00000545688 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
SNHG1-224ENST00000545688 FAM86C2PA6NEL3 165 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 DBX1A6NMT0 343 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
SNHG1-224ENST00000545688 DUSP4Q13115 394 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 NR0B2Q15466 257 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 LILRA2Q8N149 483 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 ZNF655Q8N720 491 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-224ENST00000545688 BHLHE22Q8NFJ8 381 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-224ENST00000545688 G6PC3Q9BUM1 346 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 MKRN2Q9H000 416 aaKnown RBP8.17□□□□□ -1.1
SNHG1-224ENST00000545688 EPB41L4BQ9H329 900 aa8.17□□□□□ -1.1
SNHG1-224ENST00000545688 DDX41Q9UJV9 622 aaKnown RBP8.17□□□□□ -1.1
SNHG1-224ENST00000545688 SIGLEC6O43699 453 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 ACRP10323 421 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 VAMP1P23763 118 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 ANKS4BQ8N8V4 417 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 FBXO15Q8NCQ5 510 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-224ENST00000545688 LINC01599Q8WXQ3 324 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 DCP1AQ9NPI6 582 aaPredicted RBP8.16□□□□□ -1.1
SNHG1-224ENST00000545688 TCFL5Q9UL49 500 aa8.16□□□□□ -1.1
SNHG1-224ENST00000545688 TMEM82A0PJX8 343 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 SCAMP3O14828 347 aaKnown RBP8.15□□□□□ -1.1
SNHG1-224ENST00000545688 SYPP08247 313 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 PCBP3P57721 371 aaKnown RBP8.15□□□□□ -1.1
SNHG1-224ENST00000545688 CHRNEQ04844 493 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 BBS9Q3SYG4 887 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 WAPLQ7Z5K2 1190 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 SPPL2CQ8IUH8 684 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 PPP1R16BQ96T49 567 aa8.15□□□□□ -1.1
SNHG1-224ENST00000545688 SSU72P8A0A1W2PR75 194 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 PSPNO60542 156 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 FKTNO75072 461 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 TSPAN15O95858 294 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 IMPDH2P12268 514 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 TRIM26Q12899 539 aaPredicted RBP8.14□□□□□ -1.11
SNHG1-224ENST00000545688 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 CHST7Q9NS84 486 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 GFOD1Q9NXC2 390 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 SUCOQ9UBS9 1254 aaKnown RBP8.14□□□□□ -1.11
SNHG1-224ENST00000545688 GPR160Q9UJ42 338 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 ZMYM5Q9UJ78 669 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 PPT2Q9UMR5 302 aa8.14□□□□□ -1.11
SNHG1-224ENST00000545688 C9IYK1 514 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 MEIS1O00470 390 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
SNHG1-224ENST00000545688 KRT1P04264 644 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 GALK1P51570 392 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 INTS3Q68E01 1043 aaKnown RBP8.13□□□□□ -1.11
SNHG1-224ENST00000545688 ZPBP2Q6X784 338 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 METTL16Q86W50 562 aaKnown RBP8.13□□□□□ -1.11
SNHG1-224ENST00000545688 CILP2Q8IUL8 1156 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 MAP6Q96JE9 813 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 FBXL21Q9UKT6 434 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 YBX2Q9Y2T7 364 aaKnown RBP8.13□□□□□ -1.11
SNHG1-224ENST00000545688 PCDHB12Q9Y5F1 795 aa8.13□□□□□ -1.11
SNHG1-224ENST00000545688 NOTOA8MTQ0 251 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 EFEMP2O95967 443 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 C1QTNF9P0C862 333 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 PAK2Q13177 524 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 AUHQ13825 339 aaKnown RBP8.12□□□□□ -1.11
SNHG1-224ENST00000545688 TAB3Q8N5C8 712 aaPredicted RBP8.12□□□□□ -1.11
SNHG1-224ENST00000545688 SHISA4Q96DD7 197 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
SNHG1-224ENST00000545688 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
SNHG1-224ENST00000545688 CTSKP43235 329 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 TDRD10Q5VZ19 366 aaKnown RBP8.11□□□□□ -1.11
SNHG1-224ENST00000545688 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 PPFIBP1Q86W92 1011 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 IRF2BP1Q8IU81 584 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
SNHG1-224ENST00000545688 DHRS1Q96LJ7 313 aa8.11□□□□□ -1.11
SNHG1-224ENST00000545688 SHOXO15266 292 aa8.1□□□□□ -1.11
SNHG1-224ENST00000545688 PMS1P54277 932 aaKnown RBP8.1□□□□□ -1.11
SNHG1-224ENST00000545688 SNX17Q15036 470 aa8.1□□□□□ -1.11
SNHG1-224ENST00000545688 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
SNHG1-224ENST00000545688 CCDC81Q6ZN84 652 aa8.1□□□□□ -1.11
SNHG1-224ENST00000545688 LSRQ86X29 649 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-224ENST00000545688 CCDC144CPQ8IYA2 1237 aa8.1□□□□□ -1.11
SNHG1-224ENST00000545688 C7orf61Q8IZ16 206 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms