RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 MYCP01106 439 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 CALM1P0DP23 149 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 CALM2P0DP24 149 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 CALM3P0DP25 149 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 LIFRP42702 1097 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 PRMT2P55345 433 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 JAG1P78504 1218 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 ANKRD1Q15327 319 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 ZYXQ15942 572 aaKnown RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 HABP4Q5JVS0 413 aaKnown RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
TSEN54-203ENST00000545228 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
TSEN54-203ENST00000545228 MYPNQ86TC9 1320 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 SLC1A4P43007 532 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 RBM25P49756 843 aaKnown RBP16.2■□□□□ 0.18
TSEN54-203ENST00000545228 SHROOM1Q2M3G4 852 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-203ENST00000545228 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
TSEN54-203ENST00000545228 C17orf99Q6UX52 265 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 RUFY3Q7L099 469 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 CCDC84Q86UT8 332 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-203ENST00000545228 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 PNMA1Q8ND90 353 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 ACER1Q8TDN7 264 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 GMCL1Q96IK5 515 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 ZKSCAN3Q9BRR0 538 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 CPA4Q9UI42 421 aa16.2■□□□□ 0.18
TSEN54-203ENST00000545228 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
TSEN54-203ENST00000545228 PARP14Q460N5 1801 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 HTTP42858 3142 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 F5H6K3 240 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 PDHXO00330 501 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
TSEN54-203ENST00000545228 FDX1P10109 184 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 VCAM1P19320 739 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
TSEN54-203ENST00000545228 KLRC3Q07444 240 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 SLFN13Q68D06 897 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 CLEC10AQ8IUN9 316 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 LRRC47Q8N1G4 583 aaKnown RBP16.19■□□□□ 0.18
TSEN54-203ENST00000545228 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
TSEN54-203ENST00000545228 IL17RAQ96F46 866 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 TMEM47Q9BQJ4 181 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 ZSWIM6Q9HCJ5 1215 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
TSEN54-203ENST00000545228 MYH6P13533 1939 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 NMT2O60551 498 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 DDAH1O94760 285 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 HOXD10P28358 340 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 KIF5BP33176 963 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 RCAN1P53805 252 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
TSEN54-203ENST00000545228 ADCK5Q3MIX3 580 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 CHMP4CQ96CF2 233 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
TSEN54-203ENST00000545228 SLC12A7Q9Y666 1083 aa16.18■□□□□ 0.18
TSEN54-203ENST00000545228 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
TSEN54-203ENST00000545228 ZSWIM8A7E2V4 1837 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 SH2B2O14492 632 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-203ENST00000545228 SEC24BO95487 1268 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 NDUFB10O96000 172 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 BMP3P12645 472 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 PSMC4P43686 418 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-203ENST00000545228 STAT2P52630 851 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 SEC23AQ15436 765 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 CCDC96Q2M329 555 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 SGMS1Q86VZ5 419 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 MB21D1Q8N884 522 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-203ENST00000545228 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
TSEN54-203ENST00000545228 SRRDQ9UH36 339 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 TAF6LQ9Y6J9 622 aa16.17■□□□□ 0.18
TSEN54-203ENST00000545228 ST18O60284 1047 aa16.16■□□□□ 0.18
TSEN54-203ENST00000545228 PLA2G6O60733 806 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms