RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 ATP2C1P98194 919 aaPredicted RBP14.59□□□□□ -0.07
DDX11-223ENST00000542838 E2F4Q16254 413 aa14.59□□□□□ -0.07
DDX11-223ENST00000542838 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
DDX11-223ENST00000542838 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
DDX11-223ENST00000542838 GUCA1BQ9UMX6 200 aa14.59□□□□□ -0.07
DDX11-223ENST00000542838 BCL9LQ86UU0 1499 aa14.58□□□□□ -0.07
DDX11-223ENST00000542838 VGLL3A8MV65 326 aa14.58□□□□□ -0.07
DDX11-223ENST00000542838 CHP1Q99653 195 aa14.58□□□□□ -0.07
DDX11-223ENST00000542838 IQSEC3Q9UPP2 1182 aaPredicted RBP14.58□□□□□ -0.07
DDX11-223ENST00000542838 MYH13Q9UKX3 1938 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
DDX11-223ENST00000542838 TUBBP07437 444 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 UBXN1Q04323 297 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 ADGRA1Q86SQ6 560 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 TNFRSF25Q93038 417 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 ABCF2Q9UG63 623 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 LCMT1Q9UIC8 334 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 ANAPC4Q9UJX5 808 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 MAPK8IP1Q9UQF2 711 aa14.58□□□□□ -0.08
DDX11-223ENST00000542838 MAGEB6P1A0A0J9YX57 407 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 AMPD2Q01433 879 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 PDXDC2PQ6P474 469 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 TRIM10Q9UDY6 481 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 EPN1Q9Y6I3 576 aaPredicted RBP14.57□□□□□ -0.08
DDX11-223ENST00000542838 STRCP1A6NGW2 1772 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 SOS2Q07890 1332 aaPredicted RBP14.57□□□□□ -0.08
DDX11-223ENST00000542838 MYO1CO00159 1063 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 PHACTR2O75167 634 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 NPY5RQ15761 445 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 ZNF658Q5TYW1 1059 aaPredicted RBP14.57□□□□□ -0.08
DDX11-223ENST00000542838 ZNF34Q8IZ26 560 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 FAM71BQ8TC56 605 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 MTRQ99707 1265 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 ACBD3Q9H3P7 528 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 NDUFA10O95299 355 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 MCM7P33993 719 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 PIK3AP1Q6ZUJ8 805 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 C10orf67Q8IYJ2 551 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 CCDC148Q8NFR7 591 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 PYM1Q9BRP8 204 aaKnown RBP14.57□□□□□ -0.08
DDX11-223ENST00000542838 GDAQ9Y2T3 454 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 PLCH1Q4KWH8 1693 aa14.57□□□□□ -0.08
DDX11-223ENST00000542838 CYP2D7A0A087X1C5 515 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 LRRIQ3A6PVS8 624 aaPredicted RBP14.56□□□□□ -0.08
DDX11-223ENST00000542838 RPN1P04843 607 aaKnown RBP14.56□□□□□ -0.08
DDX11-223ENST00000542838 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 RASSF4Q9H2L5 321 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 IVLP07476 585 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 TROAPQ12815 778 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 BRINP3Q76B58 766 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 SRLQ86TD4 932 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
DDX11-223ENST00000542838 REXO2Q9Y3B8 237 aaKnown RBP14.56□□□□□ -0.08
DDX11-223ENST00000542838 ITGB4P16144 1822 aa14.56□□□□□ -0.08
DDX11-223ENST00000542838 BAZ2BQ9UIF8 2168 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 PES1O00541 588 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 TRIM66O15016 1216 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 CALM1P0DP23 149 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 CALM2P0DP24 149 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 CALM3P0DP25 149 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 IGHMBP2P38935 993 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 PRCPP42785 496 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 NLRP5P59047 1200 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 SUSD4Q5VX71 490 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 WDR93Q6P2C0 686 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 TMTC3Q6ZXV5 915 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 RRP15Q9Y3B9 282 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 BAZ2AQ9UIF9 1905 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 TTC26A0AVF1 554 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 ENC1O14682 589 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 PARP1P09874 1014 aaKnown RBP14.55□□□□□ -0.08
DDX11-223ENST00000542838 IL17AQ16552 155 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 OR8K1Q8NGG5 319 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 CNTNAP5Q8WYK1 1306 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 TRAPPC11Q7Z392 1133 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 HAUS4Q9H6D7 363 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 HDAC6Q9UBN7 1215 aa14.55□□□□□ -0.08
DDX11-223ENST00000542838 DUOX1Q9NRD9 1551 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 TRIM49BA6NDI0 452 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 H7C1D1 291 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 DYNLL1P63167 89 aaKnown RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 TSR1Q2NL82 804 aaKnown RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 LUC7L2Q9Y383 392 aaKnown RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 SLIT2O94813 1529 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 USP14P54578 494 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 MB21D1Q8N884 522 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
DDX11-223ENST00000542838 MED4Q9NPJ6 270 aa14.54□□□□□ -0.08
DDX11-223ENST00000542838 PSMD14O00487 310 aa14.53□□□□□ -0.08
DDX11-223ENST00000542838 DDAH1O94760 285 aa14.53□□□□□ -0.08
DDX11-223ENST00000542838 IL6STP40189 918 aaPredicted RBP14.53□□□□□ -0.08
DDX11-223ENST00000542838 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
DDX11-223ENST00000542838 CHRNDQ07001 517 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms