RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 DHX38Q92620 1227 aaKnown RBP6.31□□□□□ -1.4
SNHG1-217ENST00000541578 DHRS1Q96LJ7 313 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 SPATA32Q96LK8 384 aa6.31□□□□□ -1.4
SNHG1-217ENST00000541578 GLI1P08151 1106 aa6.3□□□□□ -1.4
SNHG1-217ENST00000541578 COL9A2Q14055 689 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-217ENST00000541578 DAGLBQ8NCG7 672 aa6.3□□□□□ -1.4
SNHG1-217ENST00000541578 MYLIPQ8WY64 445 aa6.3□□□□□ -1.4
SNHG1-217ENST00000541578 ZNF512BQ96KM6 892 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-217ENST00000541578 SLC6A18Q96N87 628 aa6.3□□□□□ -1.4
SNHG1-217ENST00000541578 PPT2Q9UMR5 302 aa6.3□□□□□ -1.4
SNHG1-217ENST00000541578 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-217ENST00000541578 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
SNHG1-217ENST00000541578 TMC3Q7Z5M5 1100 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 ZNF655Q8N720 491 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-217ENST00000541578 RBBP8NLQ8NC74 664 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-217ENST00000541578 ABHD4Q8TB40 342 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 LIN37Q96GY3 246 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-217ENST00000541578 CRBNQ96SW2 442 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 KRTAP4-12Q9BQ66 201 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 HDAC8Q9BY41 377 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 PRDM14Q9GZV8 571 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 MKRN2Q9H000 416 aaKnown RBP6.29□□□□□ -1.4
SNHG1-217ENST00000541578 GINM1Q9NU53 330 aa6.29□□□□□ -1.4
SNHG1-217ENST00000541578 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-217ENST00000541578 HPXP02790 462 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 ZGLP1P0C6A0 271 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 ACRP10323 421 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 ERVFC1P60507 584 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 TEKQ02763 1124 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
SNHG1-217ENST00000541578 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 OXR1Q8N573 874 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-217ENST00000541578 USHBP1Q8N6Y0 703 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 PDZD8Q8NEN9 1154 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 GPRASP2Q96D09 838 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 TCTN2Q96GX1 697 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 TANGO6Q9C0B7 1094 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 CAPN10Q9HC96 672 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 SUCOQ9UBS9 1254 aaKnown RBP6.28□□□□□ -1.4
SNHG1-217ENST00000541578 FBXL21Q9UKT6 434 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 EFR3BQ9Y2G0 817 aa6.28□□□□□ -1.4
SNHG1-217ENST00000541578 SSU72P8A0A1W2PR75 194 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 SIGLEC6O43699 453 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 PRAMEF1O95521 474 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 YBX3P16989 372 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNHG1-217ENST00000541578 PMS1P54277 932 aaKnown RBP6.27□□□□□ -1.41
SNHG1-217ENST00000541578 PCBP3P57721 371 aaKnown RBP6.27□□□□□ -1.41
SNHG1-217ENST00000541578 DUSP4Q13115 394 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
SNHG1-217ENST00000541578 MLANAQ16655 118 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 SPPL2CQ8IUH8 684 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.27□□□□□ -1.41
SNHG1-217ENST00000541578 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
SNHG1-217ENST00000541578 FITM1A5D6W6 292 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-217ENST00000541578 GUCY2CP25092 1073 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 RPL10P27635 214 aaKnown RBP6.26□□□□□ -1.41
SNHG1-217ENST00000541578 CANXP27824 592 aaKnown RBP6.26□□□□□ -1.41
SNHG1-217ENST00000541578 SOX9P48436 509 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 ZNF648Q5T619 568 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-217ENST00000541578 RUFY4Q6ZNE9 571 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 LINC00116Q8NCU8 138 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 RASGRP4Q8TDF6 673 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 FOXP3Q9BZS1 431 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 TGIF2Q9GZN2 237 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 CHST7Q9NS84 486 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 TCFL5Q9UL49 500 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 ZNF281Q9Y2X9 895 aa6.26□□□□□ -1.41
SNHG1-217ENST00000541578 SYPP08247 313 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 TRHRP34981 398 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-217ENST00000541578 GJA8P48165 433 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 EIF6P56537 245 aaKnown RBP6.25□□□□□ -1.41
SNHG1-217ENST00000541578 CHRNEQ04844 493 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 CCDC81Q6ZN84 652 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 WAPLQ7Z5K2 1190 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 KSR1Q8IVT5 923 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 CCDC144CPQ8IYA2 1237 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 C7orf61Q8IZ16 206 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 LILRA2Q8N149 483 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 FAM84AQ96KN4 292 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 ZMYM5Q9UJ78 669 aa6.25□□□□□ -1.41
SNHG1-217ENST00000541578 C9IYK1 514 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 C8AP07357 584 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 ATP2B1P20020 1258 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 NR0B2Q15466 257 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 PRR23BQ6ZRT6 265 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 LSRQ86X29 649 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-217ENST00000541578 FAM177A1Q8N128 213 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-217ENST00000541578 ANKS4BQ8N8V4 417 aa6.24□□□□□ -1.41
SNHG1-217ENST00000541578 LINC01599Q8WXQ3 324 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms