RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SELENOOQ9BVL4 669 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 XDHP47989 1333 aa19.78■□□□□ 0.76
RAB40C-205ENST00000539661 H7C1D1 291 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 PPFIA1Q13136 1202 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 E2F4Q16254 413 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 CCDC122Q5T0U0 273 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 ZNF658Q5TYW1 1059 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-205ENST00000539661 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 ZNF654Q8IZM8 581 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 PHF20Q9BVI0 1012 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 LUC7L2Q9Y383 392 aaKnown RBP19.77■□□□□ 0.76
RAB40C-205ENST00000539661 TACC3Q9Y6A5 838 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 PAPPAQ13219 1627 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 GOLGA6CA6NDK9 693 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 AGPSO00116 658 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 GOLGA6DP0CG33 693 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 UBXN1Q04323 297 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 CCDC70Q6NSX1 233 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 CERS3Q8IU89 383 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 VGLL2Q8N8G2 317 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 NELFBQ8WX92 580 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 GOLGA6AQ9NYA3 693 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 HDAC6Q9UBN7 1215 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 TRIM10Q9UDY6 481 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 CAPN11Q9UMQ6 739 aa19.77■□□□□ 0.76
RAB40C-205ENST00000539661 A6NNZ2 444 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 EBAG9O00559 213 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 GNAT2P19087 354 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 HERVK_113P62684 666 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 TUBB8Q3ZCM7 444 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 JAKMIP2Q96AA8 810 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 CEP89Q96ST8 783 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 NCAPGQ9BPX3 1015 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 PLEKHA4Q9H4M7 779 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 FAM184BQ9ULE4 1060 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 GOLGA6BA6NDN3 693 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 ENC1O14682 589 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 IRAK1P51617 712 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 AMOTL1Q8IY63 956 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 TTLL11Q8NHH1 800 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 RTL9Q8NET4 1388 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 DCCP43146 1447 aa19.76■□□□□ 0.75
RAB40C-205ENST00000539661 TTC26A0AVF1 554 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 EXOC5O00471 708 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 MCTP2Q6DN12 878 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 MICALL1Q8N3F8 863 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 CCDC82Q8N4S0 544 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 MB21D1Q8N884 522 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 NACAP1Q9BZK3 213 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 RNF41Q9H4P4 317 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-205ENST00000539661 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 DOCK2Q92608 1830 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 MYH13Q9UKX3 1938 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 GSG1L2A8MUP6 293 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 ERVV-2B6SEH9 535 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 ERLIN2O94905 339 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 ATP2C1P98194 919 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-205ENST00000539661 MEA1Q16626 185 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 PDXDC2PQ6P474 469 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 AENQ8WTP8 325 aaKnown RBP19.75■□□□□ 0.75
RAB40C-205ENST00000539661 KAT14Q9H8E8 782 aa19.75■□□□□ 0.75
RAB40C-205ENST00000539661 LGALS16A8MUM7 142 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 GOLGA8KD6RF30 607 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 ANKRD65E5RJM6 399 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 MBD4O95243 580 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 CYLC1P35663 651 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 ITIH3Q06033 890 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 RIN2Q8WYP3 895 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 CCDC85AQ96PX6 553 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 MYCBPQ99417 103 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 FAM205CA6NFA0 338 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 PDE8BO95263 885 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 EEF1GP26641 437 aaKnown RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 MAP3K12Q12852 859 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 DRC1Q96MC2 740 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 CNNM1Q9NRU3 951 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 ZNF330Q9Y3S2 320 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-205ENST00000539661 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
RAB40C-205ENST00000539661 KIAA1328Q86T90 577 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 CCDC170Q8IYT3 715 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 CMTR1Q8N1G2 835 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 FNBP4Q8N3X1 1017 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 MMGT1Q8N4V1 131 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 CAGE1Q8TC20 777 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 NUP133Q8WUM0 1156 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 CAPS2Q9BXY5 557 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 SHTN1A0MZ66 631 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ANKRD18BA2A2Z9 1011 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 PRPF3O43395 683 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 SRGAP2O75044 1071 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 PARP1P09874 1014 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ITGA6P23229 1130 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 RRP12Q5JTH9 1297 aaKnown RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 TTC38Q5R3I4 469 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 WDR59Q6PJI9 974 aa19.73■□□□□ 0.75
RAB40C-205ENST00000539661 ZNF572Q7Z3I7 529 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-205ENST00000539661 SHISA4Q96DD7 197 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms