RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CIAO1O76071 339 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TRIM37O94972 964 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 TNNI1P19237 187 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 GTF2IP78347 998 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MIER3Q7Z3K6 550 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 SLC17A8Q8NDX2 589 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 OR8K1Q8NGG5 319 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 ZFP91Q96JP5 570 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-207ENST00000539563 MAP3K15Q6ZN16 1313 aa7.16□□□□□ -1.26
LSAMP-207ENST00000539563 LAD1O00515 517 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 ABCD1P33897 745 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 LONP1P36776 959 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 CERKLQ49MI3 558 aaPredicted RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 ZBTB8OSQ8IWT0 167 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 LSM14BQ9BX40 385 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 USTQ9Y2C2 406 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 CROCC2H7BZ55 1655 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 CDC42BPBQ9Y5S2 1711 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 SEMA3EO15041 775 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 PPFIA1Q13136 1202 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 MORC3Q14149 939 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 CEP57Q86XR8 500 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 PROCA1Q8NCQ7 364 aaPredicted RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 MYRIPQ8NFW9 859 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 DDX25Q9UHL0 483 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 USP17L21D6R901 530 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 I3L4J1 428 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 POLR2MP0CAP2 368 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 HOXA7P31268 230 aaPredicted RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 HPDP32754 393 aaPredicted RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 PHBP35232 272 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 MFSD14BQ5SR56 506 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 HHATQ5VTY9 493 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 RRAGAQ7L523 313 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 FBXO11Q86XK2 927 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 NOSTRINQ8IVI9 506 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 METTL14Q9HCE5 456 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 TYW1Q9NV66 732 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 RIOK3O14730 519 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 PFKFB2O60825 505 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 KRT19P08727 400 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 GABPAQ06546 454 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 HADHQ16836 314 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 FAM47AQ5JRC9 791 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 KRBA2Q6ZNG9 492 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 RUNDC3BQ96NL0 473 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 IFIH1Q9BYX4 1025 aaKnown RBP7.15□□□□□ -1.26
LSAMP-207ENST00000539563 SERTAD1Q9UHV2 236 aa7.15□□□□□ -1.26
LSAMP-207ENST00000539563 PRDM1O75626 825 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 HSPA1LP34931 641 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 RASSF2P50749 326 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 NEDD9Q14511 834 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 GKAP1Q5VSY0 366 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-207ENST00000539563 NEK8Q86SG6 692 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 SDCCAG8Q86SQ7 713 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-207ENST00000539563 PLCD3Q8N3E9 789 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 RSAD2Q8WXG1 361 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.15□□□□□ -1.27
LSAMP-207ENST00000539563 LEMD3Q9Y2U8 911 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 TNNC2P02585 160 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 OR52Z1P0C646 297 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 GPBP1Q86WP2 473 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 CCDC105Q8IYK2 499 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 TEKT3Q9BXF9 490 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 CUEDC2Q9H467 287 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 MYO1AQ9UBC5 1043 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 BCAP29Q9UHQ4 241 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 AATKQ6ZMQ8 1374 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 LPXNO60711 386 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 APBA3O96018 575 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 TECP42680 631 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 GBP6Q6ZN66 633 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 MYL10Q9BUA6 226 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 RTEL1Q9NZ71 1219 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 CDC42BPAQ5VT25 1732 aa7.15□□□□□ -1.27
LSAMP-207ENST00000539563 SAMD9LQ8IVG5 1584 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ADCY9O60503 1353 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 KCNJ18B7U540 433 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 NDUFAB1O14561 156 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 BRD1O95696 1058 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 RNASE9P60153 205 aaKnown RBP7.14□□□□□ -1.27
LSAMP-207ENST00000539563 PNOCQ13519 176 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 KCNJ12Q14500 433 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 GSDMBQ8TAX9 411 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 SAR1BQ9Y6B6 198 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 ARHGAP25P42331 645 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 MYSM1Q5VVJ2 828 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 CASC4Q6P4E1 433 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 FAM81BQ96LP2 452 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 GPR108Q9NPR9 543 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 NR1I2O75469 434 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 CMA1P23946 247 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 LIG4P49917 911 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 TYW1BQ6NUM6 668 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 C2CD5Q86YS7 1000 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 NELFCDQ8IXH7 590 aa7.14□□□□□ -1.27
LSAMP-207ENST00000539563 PRPF31Q8WWY3 499 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms