RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NMIQ13287 307 aaPredicted RBP9.43□□□□□ -0.9
CCDC7-209ENST00000539197 LILRA6Q6PI73 481 aa9.43□□□□□ -0.9
CCDC7-209ENST00000539197 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
CCDC7-209ENST00000539197 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
CCDC7-209ENST00000539197 MINPP1Q9UNW1 487 aa9.43□□□□□ -0.9
CCDC7-209ENST00000539197 PEX10O60683 326 aa9.42□□□□□ -0.9
CCDC7-209ENST00000539197 PDE6BP35913 854 aa9.42□□□□□ -0.9
CCDC7-209ENST00000539197 RNF4P78317 190 aa9.42□□□□□ -0.9
CCDC7-209ENST00000539197 CWF19L2Q2TBE0 894 aaKnown RBP9.42□□□□□ -0.9
CCDC7-209ENST00000539197 SGPP1Q9BX95 441 aa9.42□□□□□ -0.9
CCDC7-209ENST00000539197 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
CCDC7-209ENST00000539197 GREM1O60565 184 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 SEMA7AO75326 666 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-209ENST00000539197 RPL10P27635 214 aaKnown RBP9.41□□□□□ -0.9
CCDC7-209ENST00000539197 EIF4A3P38919 411 aaKnown RBP9.41□□□□□ -0.9
CCDC7-209ENST00000539197 OVOS1Q6IE37 1185 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 ZPBP2Q6X784 338 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 RNF111Q6ZNA4 994 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 TTLL10Q6ZVT0 673 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 ZNF512BQ96KM6 892 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-209ENST00000539197 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
CCDC7-209ENST00000539197 KCNQ5Q9NR82 932 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 RAPGEFL1Q9UHV5 662 aa9.41□□□□□ -0.9
CCDC7-209ENST00000539197 RAG1P15918 1043 aa9.4□□□□□ -0.9
CCDC7-209ENST00000539197 DLG4P78352 724 aa9.4□□□□□ -0.9
CCDC7-209ENST00000539197 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
CCDC7-209ENST00000539197 SYTL5Q8TDW5 730 aaPredicted RBP9.4□□□□□ -0.9
CCDC7-209ENST00000539197 IRF2BPLQ9H1B7 796 aa9.4□□□□□ -0.9
CCDC7-209ENST00000539197 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
CCDC7-209ENST00000539197 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 NBPF12Q5TAG4 269 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-209ENST00000539197 WAPLQ7Z5K2 1190 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 ZNF296Q8WUU4 475 aaPredicted RBP9.39□□□□□ -0.91
CCDC7-209ENST00000539197 TCTN2Q96GX1 697 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC7-209ENST00000539197 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 UBP1Q9NZI7 540 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 GMIPQ9P107 970 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
CCDC7-209ENST00000539197 TEX51A0A1B0GUA7 166 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 FKTNO75072 461 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 ERCC3P19447 782 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 CLCQ05315 142 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 NBPF9Q3BBW0 867 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 DAGLBQ8NCG7 672 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 GCM1Q9NP62 436 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 ZMYM5Q9UJ78 669 aa9.38□□□□□ -0.91
CCDC7-209ENST00000539197 SUPT16HQ9Y5B9 1047 aaKnown RBP9.38□□□□□ -0.91
CCDC7-209ENST00000539197 SSU72P8A0A1W2PR75 194 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 ATE1O95260 518 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 SDHBP21912 280 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 SEZ6Q53EL9 994 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 NLRX1Q86UT6 975 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 TCFL5Q9UL49 500 aa9.37□□□□□ -0.91
CCDC7-209ENST00000539197 PRAMEF1O95521 474 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 INHBBP09529 407 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 SLC14A2Q15849 920 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 GK5Q6ZS86 529 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 ZNF655Q8N720 491 aaPredicted RBP9.36□□□□□ -0.91
CCDC7-209ENST00000539197 ATG4CQ96DT6 458 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 PRDM14Q9GZV8 571 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 GGT7Q9UJ14 662 aa9.36□□□□□ -0.91
CCDC7-209ENST00000539197 OR14I1A6ND48 311 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 PCBP3P57721 371 aaKnown RBP9.35□□□□□ -0.91
CCDC7-209ENST00000539197 RAD51AP2Q09MP3 1159 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 ADGRF1Q5T601 910 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 CDCP2Q5VXM1 449 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 MAP6Q96JE9 813 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 HHIPL1Q96JK4 782 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 CNNM2Q9H8M5 875 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 EHMT1Q9H9B1 1298 aa9.35□□□□□ -0.91
CCDC7-209ENST00000539197 CNOT6Q9ULM6 557 aaKnown RBP9.35□□□□□ -0.91
CCDC7-209ENST00000539197 SYPP08247 313 aa9.34□□□□□ -0.91
CCDC7-209ENST00000539197 KIR2DL1P43626 348 aaPredicted RBP9.34□□□□□ -0.91
CCDC7-209ENST00000539197 KIR2DL2P43627 348 aaPredicted RBP9.34□□□□□ -0.91
CCDC7-209ENST00000539197 TMEM192Q8IY95 271 aa9.34□□□□□ -0.91
CCDC7-209ENST00000539197 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
CCDC7-209ENST00000539197 PLCD4Q9BRC7 762 aa9.34□□□□□ -0.91
CCDC7-209ENST00000539197 MEIS1O00470 390 aa9.33□□□□□ -0.92
CCDC7-209ENST00000539197 MRPL58Q14197 206 aaKnown RBP9.33□□□□□ -0.92
CCDC7-209ENST00000539197 CEP128Q6ZU80 1094 aa9.33□□□□□ -0.92
CCDC7-209ENST00000539197 LINC00116Q8NCU8 138 aa9.33□□□□□ -0.92
CCDC7-209ENST00000539197 BCL2L13Q9BXK5 485 aa9.33□□□□□ -0.92
CCDC7-209ENST00000539197 NRDCO43847 1150 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 MCM4P33991 863 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 SSPNQ14714 243 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 ZNF385BQ569K4 471 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 NLRC3Q7RTR2 1065 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 KRTAP4-2Q9BYR5 136 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 CRTAC1Q9NQ79 661 aa9.32□□□□□ -0.92
CCDC7-209ENST00000539197 RFXAPO00287 272 aa9.31□□□□□ -0.92
CCDC7-209ENST00000539197 PANK1Q8TE04 598 aa9.31□□□□□ -0.92
CCDC7-209ENST00000539197 KCTD3Q9Y597 815 aa9.31□□□□□ -0.92
CCDC7-209ENST00000539197 FAM86C2PA6NEL3 165 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms