RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RCSD1Q6JBY9 416 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 FSTL4Q6MZW2 842 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 TMPRSS7Q7RTY8 843 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF417Q8TAU3 575 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 IRF7Q92985 503 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 KISS1RQ969F8 398 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF587Q96SQ5 575 aaPredicted RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 ARHGEF4Q9NR80 690 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 REV1Q9UBZ9 1251 aa1.51□□□□□ -2.17
HIF1A-204ENST00000539097 NOP58Q9Y2X3 529 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 SF3B6Q9Y3B4 125 aaKnown RBP1.51□□□□□ -2.17
HIF1A-204ENST00000539097 DNAH6Q9C0G6 4158 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 A0A087X0B3 334 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 C11orf95C9JLR9 678 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 IRS4O14654 1257 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PRPF3O43395 683 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FAM153BP0C7A2 387 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 HCLS1P14317 486 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 NME1P15531 152 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 RASSF7Q02833 373 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 TCEA2Q15560 299 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PPP2R5EQ16537 467 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 MSL1Q68DK7 614 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ABHD17CQ6PCB6 329 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 RNF111Q6ZNA4 994 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 EEPD1Q7L9B9 569 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CXXC5Q7LFL8 322 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PODNQ7Z5L7 613 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 HID1Q8IV36 788 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CMIPQ8IY22 773 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ZNF384Q8TF68 577 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 XAGE3Q8WTP9 111 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SNRNP27Q8WVK2 155 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FAM46AQ96IP4 442 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PNMA5Q96PV4 448 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 APBA2Q99767 749 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 MIR1-1HGQ9H1L0 117 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CBX8Q9HC52 389 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 JPH1Q9HDC5 661 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FAM105AQ9NUU6 356 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CEP131Q9UPN4 1083 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FHOD1Q9Y613 1164 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 IGF1RP08069 1367 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ANKRD34BA5PLL1 514 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SLC22A31A6NKX4 558 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 GNB5O14775 395 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 KIF3BO15066 747 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 RAPGEF3O95398 923 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 EFEMP2O95967 443 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SSBP05455 408 aaKnown RBP eCLIP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 IBSPP21815 317 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 GUCY2CP25092 1073 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 DGKGP49619 791 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 VPS72Q15906 364 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SLC10A6Q3KNW5 377 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FGD2Q7Z6J4 655 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 AMIGO3Q86WK7 504 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CLEC10AQ8IUN9 316 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 MICALL1Q8N3F8 863 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 GSTCDQ8NEC7 633 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ATG4CQ96DT6 458 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 BTBD6Q96KE9 485 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 C8orf48Q96LL4 319 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FEZ1Q99689 392 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 MCMBPQ9BTE3 642 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 IER2Q9BTL4 223 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CYP4F12Q9HCS2 524 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ACTR10Q9NZ32 417 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FAM30AQ9NZY2 134 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PPME1Q9Y570 386 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PTCH2Q9Y6C5 1203 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ASXL2Q76L83 1435 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 BRINP1O60477 761 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ASLP04424 464 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 APPP05067 770 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 EPHX1P07099 455 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 C6orf222P0C671 652 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SDSP20132 328 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SDHAP31040 664 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 FLT3P36888 993 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 KIR2DL1P43626 348 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 KIR2DL2P43627 348 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 NOP2P46087 812 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 HSP90AA2PQ14568 343 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 GRIK4Q16099 956 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SEPT7Q16181 437 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 ZC3H12AQ5D1E8 599 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 NXNQ6DKJ4 435 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 INTS5Q6P9B9 1019 aaKnown RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 LINC00114Q6XXX2 140 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PPM1KQ8N3J5 372 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 PPP1R13LQ8WUF5 828 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 NINJ1Q92982 152 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 SCARF2Q96GP6 870 aaPredicted RBP1.5□□□□□ -2.17
HIF1A-204ENST00000539097 MRGPRX3Q96LB0 322 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 RUSC1Q9BVN2 902 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 LGR6Q9HBX8 967 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 VTA1Q9NP79 307 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 CRIM1Q9NZV1 1036 aa1.5□□□□□ -2.17
HIF1A-204ENST00000539097 TJP2Q9UDY2 1190 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms