RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	BCAP29	Q9UHQ4	241 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	GGA1	Q9UJY5	639 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	BLM	P54132	1417 aa	Predicted RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	TRAPPC8	Q9Y2L5	1435 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	ZNF518A	Q6AHZ1	1483 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	SMCO2	A6NFE2	343 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	NEURL1B	A8MQ27	555 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	BTBD18	B2RXH4	712 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	GTPBP6	O43824	516 aa	Predicted RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	TRAPPC3L	Q5T215	181 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	PHLDB3	Q6NSJ2	640 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	MAEA	Q7L5Y9	396 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	VPS37B	Q9H9H4	285 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	TFCP2L1	Q9NZI6	479 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	PCDHA5	Q9Y5H7	936 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	SYCP2	Q9BX26	1530 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	ABCA5	Q8WWZ7	1642 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	USP17L12	C9JPN9	530 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	USP17L21	D6R901	530 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	GNPAT	O15228	680 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	HSPD1	P10809	573 aa	Known RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	SARNP	P82979	210 aa	Known RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	ZNF827	Q17R98	1081 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	BLID	Q8IZY5	108 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	ANKRD42	Q8N9B4	389 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	NUP153	P49790	1475 aa	Known RBP	11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	KDM3A	Q9Y4C1	1321 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	RGS12	O14924	1447 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	TAF12	Q16514	161 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	CCDC170	Q8IYT3	715 aa		11.88	□□□□□ -0.51
ARMC8-223	ENST00000538260	WDR62	O43379	1518 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	TXNDC9	O14530	226 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	TBC1D8	O95759	1140 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	IFNB1	P01574	187 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	PPARA	Q07869	468 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	GOLGA5	Q8TBA6	731 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	LSM14B	Q9BX40	385 aa	Known RBP	11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	RIC8A	Q9NPQ8	531 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	RFC1	P35251	1148 aa	Predicted RBP	11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	ATP1A2	P50993	1020 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	CTAGE3P	Q8IX95	158 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	DNAJC10	Q8IXB1	793 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	CCDC89	Q8N998	374 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	RNF34	Q969K3	372 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	EPSTI1	Q96J88	318 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	RILP	Q96NA2	401 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	STAP2	Q9UGK3	403 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	PYCARD	Q9ULZ3	195 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	USH1C	Q9Y6N9	552 aa		11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	DNMT1	P26358	1616 aa	Known RBP	11.87	□□□□□ -0.51
ARMC8-223	ENST00000538260	CFB	P00751	764 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	ZNF853	P0CG23	659 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	ABCB4	P21439	1286 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	NDUFA8	P51970	172 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	TCIRG1	Q13488	830 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	CASC4	Q6P4E1	433 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	SRGAP1	Q7Z6B7	1085 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	CDAN1	Q8IWY9	1227 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	PLEKHA4	Q9H4M7	779 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	RTEL1	Q9NZ71	1219 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	SH3BP5	O60239	455 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MGARP	Q8TDB4	240 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	TBC1D22A	Q8WUA7	517 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MAP4K1	Q92918	833 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	HAUS7	Q99871	368 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	METTL14	Q9HCE5	456 aa	Known RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	PCDHA12	Q9UN75	941 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	TOM1	O60784	492 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	FGA	P02671	866 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MAP3K21	Q5TCX8	1036 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MCTP2	Q6DN12	878 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MAPKAPK5	Q8IW41	473 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	IFNL3	Q8IZI9	196 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	RDH13	Q8NBN7	331 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	GSDMA	Q96QA5	445 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	TMOD4	Q9NZQ9	345 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	MYCL	P12524	364 aa	Predicted RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	CCDC125	Q86Z20	511 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	TACO1	Q9BSH4	297 aa	Known RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	ZMYM6	O95789	1325 aa		11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.86	□□□□□ -0.51
ARMC8-223	ENST00000538260	PDE6A	P16499	860 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	IRX4	P78413	519 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	SLC39A14	Q15043	492 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	FAM47A	Q5JRC9	791 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	CEP120	Q8N960	986 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	OSBPL3	Q9H4L5	887 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	STK38L	Q9Y2H1	464 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	PDIA3	P30101	505 aa	Known RBP	11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	LIG3	P49916	1009 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	PPP2R5D	Q14738	602 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	GALNT17	Q6IS24	598 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	NSMF	Q6X4W1	530 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	TNNI1	P19237	187 aa		11.85	□□□□□ -0.51
ARMC8-223	ENST00000538260	SLC8A1	P32418	973 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms