RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 LIMA1Q9UHB6 759 aaKnown RBP11.59□□□□□ -0.55
DDB1-204ENST00000535147 L1RE1Q9UN81 338 aa11.59□□□□□ -0.55
DDB1-204ENST00000535147 CTAGE15A4D2H0 777 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 TRIM49BA6NDI0 452 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 KCNJ18B7U540 433 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 ENC1O14682 589 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CTAGE8P0CG41 777 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 IL6STP40189 918 aaPredicted RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 HSPA2P54652 639 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 PAK1Q13153 545 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 KCNJ12Q14500 433 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 TCP11X2Q5H9J9 407 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 HDXQ7Z353 690 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CTAGE6Q86UF2 777 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CTAGE4Q8IX94 777 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 HNRNPLLQ8WVV9 542 aaKnown RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 EEF2KMTQ96G04 330 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 RIOK1Q9BRS2 568 aaKnown RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 BRMS1Q9HCU9 246 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 GUCA1BQ9UMX6 200 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 ITIH6Q6UXX5 1313 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 PES1O00541 588 aaKnown RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 FECHP22830 423 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 USP5P45974 858 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 UBXN1Q04323 297 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 SLC4A8Q2Y0W8 1093 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 FAM47AQ5JRC9 791 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CYP26C1Q6V0L0 522 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 IQCA1Q86XH1 822 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 EXOC4Q96A65 974 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CCDC51Q96ER9 411 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 BTG4Q9NY30 223 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 HDAC6Q9UBN7 1215 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 ANAPC4Q9UJX5 808 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 REXO2Q9Y3B8 237 aaKnown RBP11.58□□□□□ -0.56
DDB1-204ENST00000535147 BCL9O00512 1426 aa11.58□□□□□ -0.56
DDB1-204ENST00000535147 CNTNAP5Q8WYK1 1306 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 LRRC10BA6NIK2 292 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 USP17L21D6R901 530 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 BMP15O95972 392 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 PRCPP42785 496 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 NLRP5P59047 1200 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 ZNF384Q8TF68 577 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 AK7Q96M32 723 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 LCMT1Q9UIC8 334 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 RWDD2AQ9UIY3 292 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 FAN1Q9Y2M0 1017 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 LRP5O75197 1615 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 BCORQ6W2J9 1755 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 BAZ2AQ9UIF9 1905 aaKnown RBP11.57□□□□□ -0.56
DDB1-204ENST00000535147 TTC26A0AVF1 554 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 ERLIN1O75477 346 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
DDB1-204ENST00000535147 CASP8Q14790 479 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 PPP2R5BQ15173 497 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 PLIN2Q99541 437 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 MYO6Q9UM54 1294 aa11.57□□□□□ -0.56
DDB1-204ENST00000535147 VGLL3A8MV65 326 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 GTPBP6O43824 516 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 PMS1P54277 932 aaKnown RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 MUM1L1Q5H9M0 696 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 CTR9Q6PD62 1173 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 IRF2BP1Q8IU81 584 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 RASGRP4Q8TDF6 673 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 CCDC102AQ96A19 550 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 EPN1Q9Y6I3 576 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 BCL9LQ86UU0 1499 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 PP2D1A8MPX8 630 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 NDUFA10O95299 355 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 RPN1P04843 607 aaKnown RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 AMPD2Q01433 879 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 WHAMMP3Q1A5X7 153 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 SLAIN2Q9P270 581 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 COL1A1P02452 1464 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 ITGB4P16144 1822 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 LRRIQ3A6PVS8 624 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 SRGAP2O75044 1071 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 EIF5P55010 431 aaKnown RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 ZNF658Q5TYW1 1059 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 ANKRD20A12PQ8NF67 263 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 CTCFLQ8NI51 663 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 FEZ2Q9UHY8 353 aaPredicted RBP11.56□□□□□ -0.56
DDB1-204ENST00000535147 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDB1-204ENST00000535147 COL4A1P02462 1669 aa11.56□□□□□ -0.56
DDB1-204ENST00000535147 PARP1P09874 1014 aaKnown RBP11.55□□□□□ -0.56
DDB1-204ENST00000535147 SCG2P13521 617 aa11.55□□□□□ -0.56
DDB1-204ENST00000535147 PIP4K2BP78356 416 aa11.55□□□□□ -0.56
DDB1-204ENST00000535147 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
DDB1-204ENST00000535147 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
DDB1-204ENST00000535147 TRIM66O15016 1216 aa11.55□□□□□ -0.56
DDB1-204ENST00000535147 CYP2D6P10635 497 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms