RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 STAP2Q9UGK3 403 aa6.96□□□□□ -1.3
CHKA-208ENST00000533910 ARAP2Q8WZ64 1704 aa6.96□□□□□ -1.3
CHKA-208ENST00000533910 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 ATXN7O15265 892 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 MMP20O60882 483 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 TRPA1O75762 1119 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 PCCAP05165 728 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 USP17L7P0C7H9 530 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 EPB42P16452 691 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 MX1P20591 662 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 CES1P23141 567 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 ANP32AP39687 249 aaKnown RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 GSK3AP49840 483 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 RACK1P63244 317 aaKnown RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 FOXO4P98177 505 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 DBN1Q16643 649 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 COL13A1Q5TAT6 717 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 PTF1AQ7RTS3 328 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 TICAM2Q86XR7 235 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 GALNT12Q8IXK2 581 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 C16orf71Q8IYS4 520 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 LINC00116Q8NCU8 138 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 SCARF2Q96GP6 870 aaPredicted RBP6.95□□□□□ -1.3
CHKA-208ENST00000533910 CRELD1Q96HD1 420 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 GSX2Q9BZM3 304 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 CAPN10Q9HC96 672 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 KCNH4Q9UQ05 1017 aa6.95□□□□□ -1.3
CHKA-208ENST00000533910 CDC45O75419 566 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 CAMTA2O94983 1202 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 UBAP2LQ14157 1087 aaKnown RBP6.94□□□□□ -1.3
CHKA-208ENST00000533910 GRM2Q14416 872 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 HLFQ16534 295 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 EFHC2Q5JST6 749 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 NLRP10Q86W26 655 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 NLRP8Q86W28 1048 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 ZNF34Q8IZ26 560 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 ZBTB38Q8NAP3 1195 aaPredicted RBP6.94□□□□□ -1.3
CHKA-208ENST00000533910 WHAMMQ8TF30 809 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 PSMD1Q99460 953 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 PA2G4Q9UQ80 394 aaKnown RBP6.94□□□□□ -1.3
CHKA-208ENST00000533910 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 UBN2Q6ZU65 1347 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 SPEF2Q9C093 1822 aa6.94□□□□□ -1.3
CHKA-208ENST00000533910 A0A1W2PP55 124 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 BNIP3LO60238 219 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 SASH1O94885 1247 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 EGFRP00533 1210 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 MAPTP10636 758 aaKnown RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 SDSP20132 328 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 PTPN12Q05209 780 aaKnown RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 TNP2Q05952 138 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 ZNF772Q68DY9 489 aaPredicted RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 KANK3Q6NY19 840 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 SREK1Q8WXA9 508 aaKnown RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 TBC1D32Q96NH3 1257 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 TINF2Q9BSI4 451 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 IL1RAPL2Q9NP60 686 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
CHKA-208ENST00000533910 ZNF609O15014 1411 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 RIC1Q4ADV7 1423 aa6.93□□□□□ -1.3
CHKA-208ENST00000533910 EFSO43281 561 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 CIAO1O76071 339 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 CSF1RP07333 972 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 RARAP10276 462 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 NFKB1P19838 968 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 CD33P20138 364 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 RBM6P78332 1123 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 G3BP1Q13283 466 aaKnown RBP eCLIP6.92□□□□□ -1.33e-6■□□□□ 11.1
CHKA-208ENST00000533910 OS9Q13438 667 aaPredicted RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 CCINQ13939 588 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 SAMD5Q5TGI4 173 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 LMBR1LQ6UX01 489 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 FAM196AQ6ZSG2 479 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 KRT27Q7Z3Y8 459 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 CLASRPQ8N2M8 674 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 GLIS3Q8NEA6 775 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 JARID2Q92833 1246 aaPredicted RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 ZNF837Q96EG3 531 aaPredicted RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 IPO9Q96P70 1041 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 TRERF1Q96PN7 1200 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 NUCKS1Q9H1E3 243 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 CCSER2Q9H7U1 834 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 UPF2Q9HAU5 1272 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 CCNL1Q9UK58 526 aaPredicted RBP6.92□□□□□ -1.3
CHKA-208ENST00000533910 PCDHGC4Q9Y5F7 938 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 RTL9Q8NET4 1388 aa6.92□□□□□ -1.3
CHKA-208ENST00000533910 TNRC6CQ9HCJ0 1690 aaKnown RBP6.91□□□□□ -1.3
CHKA-208ENST00000533910 EP400Q96L91 3159 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms