RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 NFXL1Q6ZNB6 911 aa11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 SMARCC2Q8TAQ2 1214 aa11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 GBA2Q9HCG7 927 aaPredicted RBP11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 CSADQ9Y600 493 aa11.95□□□□□ -0.5
CAPRIN1-215ENST00000533657 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 C19orf81C9J6K1 198 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 LARGE1O95461 756 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 METAP2P50579 478 aaKnown RBP eCLIP11.94□□□□□ -0.58e-7■□□□□ 8.2
CAPRIN1-215ENST00000533657 PPIL2Q13356 520 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 PRAMEF18Q5VWM3 479 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 VCPKMTQ9H867 229 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 FAM217BQ9NTX9 383 aaPredicted RBP11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 KCNH4Q9UQ05 1017 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 SCRN1Q12765 414 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 CLIP2Q9UDT6 1046 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
CAPRIN1-215ENST00000533657 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 GOLGA8AA7E2F4 631 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 TRAF5O00463 557 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 CXCL11O14625 94 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 CDKL5O76039 1030 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 PDHBP11177 359 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 NTRK3Q16288 839 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 RTN1Q16799 776 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 CSPP1Q1MSJ5 1256 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 SHROOM1Q2M3G4 852 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 BTNL9Q6UXG8 535 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 C2orf69Q8N8R5 385 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZNF280CQ8ND82 737 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 IFNAR1P17181 557 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 RAB3GAP1Q15042 981 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 USP17L2Q6R6M4 530 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZNF526Q8TF50 670 aaPredicted RBP11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
CAPRIN1-215ENST00000533657 A0A1W2PRG0 241 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 YY1P25490 414 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZNF543Q08ER8 600 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 FUT2Q10981 343 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 CTCFLQ8NI51 663 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 USP17L10C9JJH3 530 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 WDR46O15213 610 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 BACE1P56817 501 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 HMGN5P82970 282 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZKSCAN4Q969J2 545 aaPredicted RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 PPP1R9BQ96SB3 815 aa11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
CAPRIN1-215ENST00000533657 SRCAPQ6ZRS2 3230 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 CELF2O95319 508 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 PARP1P09874 1014 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 CST9Q5W186 159 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 NSUN7Q8NE18 718 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 MYPNQ86TC9 1320 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 F5H6K3 240 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 NDUFB10O96000 172 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 DDIT3P35638 169 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 KLRC3Q07444 240 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 SLFN13Q68D06 897 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 DLK2Q6UY11 383 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 NBPF11Q86T75 865 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 CLEC10AQ8IUN9 316 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 PROCA1Q8NCQ7 364 aaPredicted RBP11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 MTMR8Q96EF0 704 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
CAPRIN1-215ENST00000533657 FMNL1O95466 1100 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 CTDNEP1O95476 244 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 CDC27P30260 824 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 ACER1Q8TDN7 264 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 BCCIPQ9P287 314 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 SLC45A1Q9Y2W3 748 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 HS1BP3Q53T59 392 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 FAM160B2Q86V87 743 aa11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
CAPRIN1-215ENST00000533657 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 FDX1P10109 184 aa11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 ECE1P42892 770 aa11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 SASS6Q6UVJ0 657 aa11.9□□□□□ -0.51
CAPRIN1-215ENST00000533657 CCDC83Q8IWF9 413 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms