RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KLRC3Q07444 240 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 FAM83BQ5T0W9 1011 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 TRIB2Q92519 343 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 ATG4CQ96DT6 458 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 MOV10L1Q9BXT6 1211 aaKnown RBP19.75■□□□□ 0.75
PKP3-209ENST00000533069 PPP1R9AQ9ULJ8 1098 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 ADAMTS5Q9UNA0 930 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 A0A0G2JMZ2 1700 aa19.75■□□□□ 0.75
PKP3-209ENST00000533069 BRCA2P51587 3418 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 ORC4O43929 436 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 NDUFB10O96000 172 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 FGAP02671 866 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 ZKSCAN1P17029 563 aaPredicted RBP19.74■□□□□ 0.75
PKP3-209ENST00000533069 PDE4AP27815 886 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 CTDSPL2Q05D32 466 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 MAP2K5Q13163 448 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 FAM47AQ5JRC9 791 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 GMCL1P1Q8NEA9 526 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 U2AF1L4Q8WU68 220 aaKnown RBP19.74■□□□□ 0.75
PKP3-209ENST00000533069 SHISA4Q96DD7 197 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 MROH8Q9H579 483 aa19.74■□□□□ 0.75
PKP3-209ENST00000533069 PAK6Q9NQU5 681 aaPredicted RBP19.74■□□□□ 0.75
PKP3-209ENST00000533069 TSPY2A6NKD2 308 aa19.73■□□□□ 0.75
PKP3-209ENST00000533069 STRNO43815 780 aa19.73■□□□□ 0.75
PKP3-209ENST00000533069 FGRP09769 529 aa19.73■□□□□ 0.75
PKP3-209ENST00000533069 GRB14Q14449 540 aa19.73■□□□□ 0.75
PKP3-209ENST00000533069 RPTORQ8N122 1335 aa19.73■□□□□ 0.75
PKP3-209ENST00000533069 VWA5AO00534 786 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 SGPL1O95470 568 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 SLC25A27O95847 323 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 HOXC6P09630 235 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 PCP11498 1178 aaKnown RBP19.72■□□□□ 0.75
PKP3-209ENST00000533069 PLS1Q14651 629 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 TTC22Q5TAA0 569 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 MAP3K21Q5TCX8 1036 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 SAMD1Q6SPF0 538 aaPredicted RBP19.72■□□□□ 0.75
PKP3-209ENST00000533069 CWC27Q6UX04 472 aaKnown RBP19.72■□□□□ 0.75
PKP3-209ENST00000533069 SLF1Q9BQI6 1058 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.72■□□□□ 0.754e-9■■■□□ 14.6
PKP3-209ENST00000533069 HMX1Q9NP08 348 aaPredicted RBP19.72■□□□□ 0.75
PKP3-209ENST00000533069 FBXO28Q9NVF7 368 aa19.72■□□□□ 0.75
PKP3-209ENST00000533069 RANBP6O60518 1105 aaKnown RBP19.71■□□□□ 0.75
PKP3-209ENST00000533069 ERCC3P19447 782 aa19.71■□□□□ 0.75
PKP3-209ENST00000533069 COPB2P35606 906 aa19.71■□□□□ 0.75
PKP3-209ENST00000533069 TMEM132BQ14DG7 1078 aa19.71■□□□□ 0.75
PKP3-209ENST00000533069 PRPF38BQ5VTL8 546 aaKnown RBP19.71■□□□□ 0.75
PKP3-209ENST00000533069 LRRC47Q8N1G4 583 aaKnown RBP19.71■□□□□ 0.75
PKP3-209ENST00000533069 DEFB118Q96PH6 123 aa19.71■□□□□ 0.75
PKP3-209ENST00000533069 NUP88Q99567 741 aaPredicted RBP19.71■□□□□ 0.75
PKP3-209ENST00000533069 PLXNB2O15031 1838 aa19.7■□□□□ 0.74
PKP3-209ENST00000533069 KIAA0100Q14667 2235 aaKnown RBP19.7■□□□□ 0.74
PKP3-209ENST00000533069 PRKAR2AP13861 404 aaKnown RBP19.7■□□□□ 0.74
PKP3-209ENST00000533069 NT5C2P49902 561 aa19.7■□□□□ 0.74
PKP3-209ENST00000533069 ABRAQ8N0Z2 381 aa19.7■□□□□ 0.74
PKP3-209ENST00000533069 PRPF38AQ8NAV1 312 aaKnown RBP19.7■□□□□ 0.74
PKP3-209ENST00000533069 STX8Q9UNK0 236 aa19.7■□□□□ 0.74
PKP3-209ENST00000533069 RLFQ13129 1914 aa19.7■□□□□ 0.74
PKP3-209ENST00000533069 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
PKP3-209ENST00000533069 TRIM32Q13049 653 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 SLFN13Q68D06 897 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 NCAPG2Q86XI2 1143 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 RIOX2Q8IUF8 465 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 GMCL1Q96IK5 515 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 CRISPLD2Q9H0B8 497 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 RNF41Q9H4P4 317 aaPredicted RBP19.69■□□□□ 0.74
PKP3-209ENST00000533069 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 TOMM22Q9NS69 142 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 SLC5A4Q9NY91 659 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 FEM1BQ9UK73 627 aa19.69■□□□□ 0.74
PKP3-209ENST00000533069 ZNF214Q9UL59 606 aaPredicted RBP19.69■□□□□ 0.74
PKP3-209ENST00000533069 ZNF236Q9UL36 1845 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
PKP3-209ENST00000533069 ADORA2AP29274 412 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 STAT3P40763 770 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 NOVP48745 357 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 CCL14Q16627 93 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 AKNAD1Q5T1N1 836 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 MFSD14CQ5VZR4 134 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 MFSD6Q6ZSS7 791 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 UBE2Q1Q7Z7E8 422 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 DPP9Q86TI2 863 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 REPS2Q8NFH8 660 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 STAG1Q8WVM7 1258 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 DSCC1Q9BVC3 393 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 TEX13BQ9BXU2 312 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 IL17RBQ9NRM6 502 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 TACC3Q9Y6A5 838 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 RAD50Q92878 1312 aa19.68■□□□□ 0.74
PKP3-209ENST00000533069 ZNF213O14771 459 aa19.67■□□□□ 0.74
PKP3-209ENST00000533069 FARP2O94887 1054 aaPredicted RBP19.67■□□□□ 0.74
PKP3-209ENST00000533069 FCER1AP12319 257 aa19.67■□□□□ 0.74
PKP3-209ENST00000533069 BMP3P12645 472 aa19.67■□□□□ 0.74
PKP3-209ENST00000533069 HAND2P61296 217 aa19.67■□□□□ 0.74
PKP3-209ENST00000533069 CACNB2Q08289 660 aaPredicted RBP19.67■□□□□ 0.74
PKP3-209ENST00000533069 TCP11L1Q9NUJ3 509 aa19.67■□□□□ 0.74
PKP3-209ENST00000533069 CTDP1Q9Y5B0 961 aaPredicted RBP19.67■□□□□ 0.74
PKP3-209ENST00000533069 MKI67P46013 3256 aaKnown RBP19.66■□□□□ 0.74
PKP3-209ENST00000533069 ATP2A1O14983 1001 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 NMT2O60551 498 aa19.66■□□□□ 0.74
PKP3-209ENST00000533069 ZBED4O75132 1171 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms