RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 DNAJA2O60884 412 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 HTR3BO95264 441 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 EFEMP2O95967 443 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 PF4P02776 101 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 TCF3P15923 654 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 SNX17Q15036 470 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 RHOVQ96L33 236 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 FAM161BQ96MY7 647 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 CNOT6Q9ULM6 557 aaKnown RBP6.94□□□□□ -1.3
USP47-211ENST00000531513 USP31Q70CQ4 1352 aa6.94□□□□□ -1.3
USP47-211ENST00000531513 NOTOA8MTQ0 251 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
USP47-211ENST00000531513 CLEC16AQ2KHT3 1053 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 TMEM132EQ6IEE7 984 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 CCDC74BQ96LY2 380 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 ZNF281Q9Y2X9 895 aa6.93□□□□□ -1.3
USP47-211ENST00000531513 USP2O75604 605 aaPredicted RBP6.92□□□□□ -1.3
USP47-211ENST00000531513 BMP7P18075 431 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 XPCQ01831 940 aaPredicted RBP6.92□□□□□ -1.3
USP47-211ENST00000531513 SSPNQ14714 243 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 KIF2CQ99661 725 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 ZCCHC4Q9H5U6 513 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 KCTD3Q9Y597 815 aa6.92□□□□□ -1.3
USP47-211ENST00000531513 A0A0G2JLL6 359 aaPredicted RBP6.91□□□□□ -1.3
USP47-211ENST00000531513 OR14I1A6ND48 311 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
USP47-211ENST00000531513 ADGRF1Q5T601 910 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 NLRX1Q86UT6 975 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 VWCEQ96DN2 955 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 CRELD1Q96HD1 420 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 TMEM74Q96NL1 305 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 KCNC2Q96PR1 638 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 HDAC8Q9BY41 377 aa6.91□□□□□ -1.3
USP47-211ENST00000531513 RFXAPO00287 272 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
USP47-211ENST00000531513 FAM160A1Q05DH4 1040 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 ZNF385BQ569K4 471 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 RNF111Q6ZNA4 994 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 RELTQ969Z4 430 aa6.9□□□□□ -1.3
USP47-211ENST00000531513 SORBS3O60504 671 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 TRIM13O60858 407 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 PI3P19957 117 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 GBP1P32455 592 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 GBP2P32456 591 aaPredicted RBP6.89□□□□□ -1.31
USP47-211ENST00000531513 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 FBXO27Q8NI29 283 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 SYTL5Q8TDW5 730 aaPredicted RBP6.89□□□□□ -1.31
USP47-211ENST00000531513 MAP6Q96JE9 813 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 FOXP3Q9BZS1 431 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 BCL11AQ9H165 835 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
USP47-211ENST00000531513 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
USP47-211ENST00000531513 ZMYM5Q9UJ78 669 aa6.89□□□□□ -1.31
USP47-211ENST00000531513 UBOX5O94941 541 aa6.88□□□□□ -1.31
USP47-211ENST00000531513 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
USP47-211ENST00000531513 MPP2Q14168 576 aa6.88□□□□□ -1.31
USP47-211ENST00000531513 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
USP47-211ENST00000531513 ENOX1Q8TC92 643 aaKnown RBP6.88□□□□□ -1.31
USP47-211ENST00000531513 C8orf37Q96NL8 207 aa6.88□□□□□ -1.31
USP47-211ENST00000531513 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 RGS13O14921 159 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 NRDCO43847 1150 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 EPHB3P54753 998 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 RNF4P78317 190 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 SRSF3P84103 164 aaKnown RBP6.87□□□□□ -1.31
USP47-211ENST00000531513 TMC3Q7Z5M5 1100 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 RELL1Q8IUW5 271 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 MARCH10Q8NA82 808 aaPredicted RBP6.87□□□□□ -1.31
USP47-211ENST00000531513 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 TCTN2Q96GX1 697 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 HHIPL1Q96JK4 782 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 RSRP1Q9BUV0 290 aa6.87□□□□□ -1.31
USP47-211ENST00000531513 HRKO00198 91 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 TLR3O15455 904 aaKnown RBP6.86□□□□□ -1.31
USP47-211ENST00000531513 RECKO95980 971 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 GARTP22102 1010 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 KIR2DL1P43626 348 aaPredicted RBP6.86□□□□□ -1.31
USP47-211ENST00000531513 KIR2DL2P43627 348 aaPredicted RBP6.86□□□□□ -1.31
USP47-211ENST00000531513 SLC14A2Q15849 920 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 BBS9Q3SYG4 887 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 ARSHQ5FYA8 562 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 CEP128Q6ZU80 1094 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 TMEM151BQ8IW70 566 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 SIGLEC10Q96LC7 697 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 CRTAC1Q9NQ79 661 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 TCFL5Q9UL49 500 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 JAG2Q9Y219 1238 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 IRAK3Q9Y616 596 aa6.86□□□□□ -1.31
USP47-211ENST00000531513 FOXD2O60548 495 aaPredicted RBP6.85□□□□□ -1.31
USP47-211ENST00000531513 FKTNO75072 461 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 SDHBP21912 280 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 VIPR1P32241 457 aa6.85□□□□□ -1.31
USP47-211ENST00000531513 PCBP3P57721 371 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms