RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 TNK2Q07912 1038 aa8.94□□□□□ -0.98
CASP4-208ENST00000530309 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
CASP4-208ENST00000530309 FGD4Q96M96 766 aa8.94□□□□□ -0.98
CASP4-208ENST00000530309 U3KQE9 123 aa8.94□□□□□ -0.98
CASP4-208ENST00000530309 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
CASP4-208ENST00000530309 TLDC2A0PJX2 215 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 CYP26A1O43174 497 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 PPM1BO75688 479 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 ITGA4P13612 1032 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 SNW1Q13573 536 aaKnown RBP8.93□□□□□ -0.98
CASP4-208ENST00000530309 NKPD1Q17RQ9 610 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 SV2CQ496J9 727 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
CASP4-208ENST00000530309 SPATC1Q76KD6 591 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
CASP4-208ENST00000530309 PRR13Q9NZ81 148 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 ZMYM5Q9UJ78 669 aa8.93□□□□□ -0.98
CASP4-208ENST00000530309 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
CASP4-208ENST00000530309 A0A087WZG4 1122 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 PRR19A6NJB7 356 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 FURINP09958 794 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 ITIH2P19823 946 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 ZNF445P59923 1031 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 NMIQ13287 307 aaPredicted RBP8.92□□□□□ -0.98
CASP4-208ENST00000530309 TMC3Q7Z5M5 1100 aa8.92□□□□□ -0.98
CASP4-208ENST00000530309 ZNF513Q8N8E2 541 aaPredicted RBP8.92□□□□□ -0.98
CASP4-208ENST00000530309 IQCA1LA6NCM1 817 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 AGRPO00253 132 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 CEACAM5P06731 702 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 FOSL1P15407 271 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 SSRP1Q08945 709 aaKnown RBP8.91□□□□□ -0.98
CASP4-208ENST00000530309 SPACA3Q8IXA5 215 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 ENOX1Q8TC92 643 aaKnown RBP8.91□□□□□ -0.98
CASP4-208ENST00000530309 RCC1LQ96I51 464 aaKnown RBP8.91□□□□□ -0.98
CASP4-208ENST00000530309 GPR62Q9BZJ7 368 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 GFOD1Q9NXC2 390 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 APEX2Q9UBZ4 518 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 PFDN2Q9UHV9 154 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 SUGT1Q9Y2Z0 365 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 TBX22Q9Y458 520 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 ST14Q9Y5Y6 855 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 FHOD1Q9Y613 1164 aa8.91□□□□□ -0.98
CASP4-208ENST00000530309 SIGLEC6O43699 453 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 SMARCA5O60264 1052 aaPredicted RBP8.9□□□□□ -0.98
CASP4-208ENST00000530309 DIAPH1O60610 1272 aaKnown RBP8.9□□□□□ -0.98
CASP4-208ENST00000530309 PRSS36Q5K4E3 855 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 JAZF1Q86VZ6 243 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 BVESQ8NE79 360 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 NETO1Q8TDF5 533 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 SYTL5Q8TDW5 730 aaPredicted RBP8.9□□□□□ -0.98
CASP4-208ENST00000530309 BRF1Q92994 677 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 SGSM3Q96HU1 749 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 DUSP15Q9H1R2 295 aaPredicted RBP8.9□□□□□ -0.98
CASP4-208ENST00000530309 SEMA6BQ9H3T3 888 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 LRP2BPQ9P2M1 347 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 PLAGL2Q9UPG8 496 aa8.9□□□□□ -0.98
CASP4-208ENST00000530309 KDM2BQ8NHM5 1336 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 SHISA3A0PJX4 238 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 PRAMEF1O95521 474 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 SRFP11831 508 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 CLEC16AQ2KHT3 1053 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 CDKAL1Q5VV42 579 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 LRRC47Q8N1G4 583 aaKnown RBP8.89□□□□□ -0.99
CASP4-208ENST00000530309 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 ADCY4Q8NFM4 1077 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 PPP1R14AQ96A00 147 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 RNPC3Q96LT9 517 aaKnown RBP8.89□□□□□ -0.99
CASP4-208ENST00000530309 SPATA9Q9BWV2 254 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 TRIT1Q9H3H1 467 aaKnown RBP8.89□□□□□ -0.99
CASP4-208ENST00000530309 CHST7Q9NS84 486 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 GPATCH2Q9NW75 528 aa8.89□□□□□ -0.99
CASP4-208ENST00000530309 DIS3Q9Y2L1 958 aaKnown RBP8.89□□□□□ -0.99
CASP4-208ENST00000530309 MRPL42Q9Y6G3 142 aaKnown RBP8.89□□□□□ -0.99
CASP4-208ENST00000530309 NOP56O00567 594 aaKnown RBP8.88□□□□□ -0.99
CASP4-208ENST00000530309 CLCN7P51798 805 aa8.88□□□□□ -0.99
CASP4-208ENST00000530309 IFI16Q16666 785 aaKnown RBP8.88□□□□□ -0.99
CASP4-208ENST00000530309 PLD6Q8N2A8 252 aaKnown RBP8.88□□□□□ -0.99
CASP4-208ENST00000530309 FIBCD1Q8N539 461 aa8.88□□□□□ -0.99
CASP4-208ENST00000530309 JMYQ8N9B5 988 aa8.88□□□□□ -0.99
CASP4-208ENST00000530309 DSCC1Q9BVC3 393 aa8.88□□□□□ -0.99
CASP4-208ENST00000530309 ZC3H7BQ9UGR2 993 aaKnown RBP8.88□□□□□ -0.99
CASP4-208ENST00000530309 AKT3Q9Y243 479 aa8.88□□□□□ -0.99
CASP4-208ENST00000530309 A0A1W2PQU0 124 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 ITGAVP06756 1048 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 POMZP3Q6PJE2 187 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 ZNF655Q8N720 491 aaPredicted RBP8.87□□□□□ -0.99
CASP4-208ENST00000530309 DAGLBQ8NCG7 672 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 SH3TC2Q8TF17 1288 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 THAP3Q8WTV1 239 aaPredicted RBP8.87□□□□□ -0.99
CASP4-208ENST00000530309 HSPA12BQ96MM6 686 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 HDAC8Q9BY41 377 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 NOL6Q9H6R4 1146 aaKnown RBP8.87□□□□□ -0.99
CASP4-208ENST00000530309 CGGBP1Q9UFW8 167 aaPredicted RBP8.87□□□□□ -0.99
CASP4-208ENST00000530309 MINPP1Q9UNW1 487 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 EMC9Q9Y3B6 208 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 SNX11Q9Y5W9 270 aa8.87□□□□□ -0.99
CASP4-208ENST00000530309 TMEM265A0A087WTH1 108 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms