RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 USP17L5A8MUK1 530 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 MINDY4BA8MYZ0 360 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CXCL11O14625 94 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 FGAP02671 866 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 ASNSP08243 561 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 TDO2P48775 406 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CDK8P49336 464 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 GTF2A2P52657 109 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 SREBF2Q12772 1141 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 NAPBQ9H115 298 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 KCNH4Q9UQ05 1017 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 MYH7P12883 1935 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CDK5RAP2Q96SN8 1893 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 FOCADQ5VW36 1801 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 GDF11O95390 407 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CETPP11597 493 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 IRX3P78415 501 aaPredicted RBP7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 SNAPC2Q13487 334 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 ABCB5Q2M3G0 1257 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 PLPP6Q8IY26 295 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 SLC44A5Q8NCS7 719 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 RUFY2Q8WXA3 655 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CCDC17Q96LX7 622 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 PTPN18Q99952 460 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 WDR18Q9BV38 432 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 IL25Q9H293 177 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 CABP5Q9NP86 173 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 RNF186Q9NXI6 227 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 ANAPC4Q9UJX5 808 aa7.43□□□□□ -1.22
ATPAF1-209ENST00000529214 MYH1P12882 1939 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 CCL15-CCL14A0A0B4J2E2 113 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 SGSM2O43147 1006 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 CA12O43570 354 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 TRPA1O75762 1119 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 AP1G2O75843 785 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 GH2P01242 217 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 FGRP09769 529 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 VAMP1P23763 118 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 GUCY1A2P33402 732 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 PPARAQ07869 468 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 SPP2Q13103 211 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 MOGSQ13724 837 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 CCL15Q16663 113 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 SHROOM1Q2M3G4 852 aaPredicted RBP7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 NAALADL2Q58DX5 795 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 BRI3BPQ8WY22 251 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 DSCC1Q9BVC3 393 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 AS3MTQ9HBK9 375 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 ZNF287Q9HBT7 754 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 ZSWIM6Q9HCJ5 1215 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 TFIP11Q9UBB9 837 aaKnown RBP7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 ZBTB21Q9ULJ3 1066 aa7.42□□□□□ -1.22
ATPAF1-209ENST00000529214 ZMYM6O95789 1325 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 RAD50Q92878 1312 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 SIPA1L1O43166 1804 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 A0A0G2JLL6 359 aaPredicted RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 C19orf81C9J6K1 198 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 IGF2BP3O00425 579 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 FOXN1O15353 648 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 ALDH1A1P00352 501 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 SLC3A2P08195 630 aaKnown RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 AKR1B1P15121 316 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 RASA1P20936 1047 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 BACE1P56817 501 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 CTDSPL2Q05D32 466 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 PDE4BQ07343 736 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 SEPT2Q15019 361 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 NOM1Q5C9Z4 860 aaKnown RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 OTUD7BQ6GQQ9 843 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 TMEM179Q6ZVK1 233 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 FASTKD5Q7L8L6 764 aaKnown RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 PRRT2Q7Z6L0 340 aaPredicted RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 SIAH1Q8IUQ4 282 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 ZNF444Q8N0Y2 327 aaPredicted RBP7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 CFHR5Q9BXR6 569 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 SAGE1Q9NXZ1 904 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 ROBO3Q96MS0 1386 aa7.41□□□□□ -1.22
ATPAF1-209ENST00000529214 TRIM75PA6NK02 468 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 BTBD19C9JJ37 291 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 MPHOSPH10O00566 681 aaKnown RBP7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 ZNF213O14771 459 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 PTH1RQ03431 593 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 GPAT2Q6NUI2 795 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 ANKRD23Q86SG2 305 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 FAM43AQ8N2R8 423 aa7.4□□□□□ -1.22
ATPAF1-209ENST00000529214 MAP4K1Q92918 833 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms