RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 CCDC34Q96HJ3 373 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 CSRNP2Q9H175 543 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 hCG_1984214I3L0E3 225 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 TTLL1O95922 423 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 SNHG28P0DPA3 235 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 AKR1B1P15121 316 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 SHMT1P34896 483 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 ZNF75DP51815 510 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 GRIN1Q05586 938 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 AOC3Q16853 763 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 ASPRV1Q53RT3 343 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 RTKN2Q8IZC4 609 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 ZNF713Q8N859 430 aaPredicted RBP18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 PIBF1Q8WXW3 757 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 RRP36Q96EU6 259 aaKnown RBP18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 TRIM5Q9C035 493 aa18.12■□□□□ 0.49
FOXRED1-207ENST00000527004 STXBP3O00186 592 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 GOLGA8HP0CJ92 632 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 PDHBP11177 359 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 CDC25BP30305 580 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 ZNF174Q15697 407 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 DPCR1Q3MIW9 517 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 ARL6IP4Q66PJ3 421 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 USP17L2Q6R6M4 530 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 TTLL6Q8N841 843 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 GPKOWQ92917 476 aaPredicted RBP eCLIP18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 ZMYND12Q9H0C1 365 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 ZNF219Q9P2Y4 722 aaPredicted RBP18.11■□□□□ 0.49
FOXRED1-207ENST00000527004 NFIAQ12857 509 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 SPECC1Q5M775 1068 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 TYW1BQ6NUM6 668 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 CCDC125Q86Z20 511 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 PI4KBQ9UBF8 816 aa18.1■□□□□ 0.49
FOXRED1-207ENST00000527004 SMTNL1A8MU46 457 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 POLR2DO15514 142 aaKnown RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PTGDRQ13258 359 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 NT5DC1Q5TFE4 455 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 MRFAP1L1Q96HT8 127 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PSMD1Q99460 953 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PYM1Q9BRP8 204 aaKnown RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 VPS33BQ9H267 617 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 SEC63Q9UGP8 760 aaKnown RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 MTMR7Q9Y216 660 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 CCDC194A0A1B0GVG4 234 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 USP17L5A8MUK1 530 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 IKBKBO14920 756 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 C21orf2O43822 256 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 GNA11P29992 359 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 RBM5P52756 815 aaKnown RBP eCLIP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PNOCQ13519 176 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 NOM1Q5C9Z4 860 aaKnown RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 FOXP4Q8IVH2 680 aaPredicted RBP18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PCDHA6Q9UN73 950 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 PCDHA8Q9Y5H6 950 aa18.09■□□□□ 0.49
FOXRED1-207ENST00000527004 ESYT2A0FGR8 921 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 WNT7AO00755 349 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 TPM4P67936 248 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 POSTNQ15063 836 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 AOPEPQ8N6M6 819 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 C6orf50Q9HD87 102 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 CLIP2Q9UDT6 1046 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 FAM198AQ9UFP1 575 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 PCDHA5Q9Y5H7 936 aa18.08■□□□□ 0.48
FOXRED1-207ENST00000527004 A0A087WWV3 80 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 BIN1O00499 593 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 ACTN4O43707 911 aaKnown RBP18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 ENTPD3O75355 529 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 SARSP49591 514 aaKnown RBP18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 TRIML1Q8N9V2 468 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 SERTAD1Q9UHV2 236 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 LAD1O00515 517 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 NAPAP54920 295 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 KRT25Q7Z3Z0 450 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 ZFPM1Q8IX07 1006 aa18.07■□□□□ 0.48
FOXRED1-207ENST00000527004 YDJCA8MPS7 323 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 ADAMTS3O15072 1205 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 SLFN14P0C7P3 912 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 MCM7P33993 719 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 SOGA3Q5TF21 947 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 TATDN1Q6P1N9 297 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 USP49Q70CQ1 688 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 DEFB132Q7Z7B7 95 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 C4orf32Q8N8J7 132 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 SPATA20Q8TB22 786 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 SYMPKQ92797 1274 aaKnown RBP18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 MKL1Q969V6 931 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 ATRNL1Q5VV63 1379 aa18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 COL2A1P02458 1487 aaPredicted RBP18.06■□□□□ 0.48
FOXRED1-207ENST00000527004 ZNF646O15015 1829 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms