RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 GREB1LQ9C091 1923 aaPredicted RBP13.05□□□□□ -0.32
CTSB-207ENST00000524654 ORC4O43929 436 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 SGPL1O95470 568 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 NDUFB10O96000 172 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 HOXC6P09630 235 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 MAP2K5Q13163 448 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 GRB14Q14449 540 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 TMEM132BQ14DG7 1078 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 UBE2Q1Q7Z7E8 422 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 TRMT44Q8IYL2 757 aaKnown RBP13.04□□□□□ -0.32
CTSB-207ENST00000524654 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 NUP88Q99567 741 aaPredicted RBP13.04□□□□□ -0.32
CTSB-207ENST00000524654 APBA2Q99767 749 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 IL17RBQ9NRM6 502 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 RPTORQ8N122 1335 aa13.04□□□□□ -0.32
CTSB-207ENST00000524654 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
CTSB-207ENST00000524654 HIP1O00291 1037 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 VWA5AO00534 786 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 STRNO43815 780 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 RAD21O60216 631 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
CTSB-207ENST00000524654 ZKSCAN1P17029 563 aaPredicted RBP13.03□□□□□ -0.32
CTSB-207ENST00000524654 CAPN2P17655 700 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 ERCC3P19447 782 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 MFAP1P55081 439 aaKnown RBP13.03□□□□□ -0.32
CTSB-207ENST00000524654 CCL14Q16627 93 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 CWC27Q6UX04 472 aaKnown RBP13.03□□□□□ -0.32
CTSB-207ENST00000524654 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 DEFB118Q96PH6 123 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 CRISPLD2Q9H0B8 497 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTSB-207ENST00000524654 MROH8Q9H579 483 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
CTSB-207ENST00000524654 IVNS1ABPQ9Y6Y0 642 aa13.03□□□□□ -0.32
CTSB-207ENST00000524654 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
CTSB-207ENST00000524654 TSPY2A6NKD2 308 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 IGHA2P01877 340 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.33
CTSB-207ENST00000524654 NOVP48745 357 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 TTC22Q5TAA0 569 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
CTSB-207ENST00000524654 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
CTSB-207ENST00000524654 SLF1Q9BQI6 1058 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 HMX1Q9NP08 348 aaPredicted RBP13.02□□□□□ -0.33
CTSB-207ENST00000524654 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 ZNF214Q9UL59 606 aaPredicted RBP13.02□□□□□ -0.33
CTSB-207ENST00000524654 PLXNB2O15031 1838 aa13.02□□□□□ -0.33
CTSB-207ENST00000524654 NMT2O60551 498 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 ADORA2AP29274 412 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 CACNB2Q08289 660 aaPredicted RBP13.01□□□□□ -0.33
CTSB-207ENST00000524654 PLS1Q14651 629 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 PPP4R3BQ5MIZ7 849 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
CTSB-207ENST00000524654 RIOX2Q8IUF8 465 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 PRPF38AQ8NAV1 312 aaKnown RBP13.01□□□□□ -0.33
CTSB-207ENST00000524654 FLRT1Q9NZU1 646 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 RLFQ13129 1914 aa13.01□□□□□ -0.33
CTSB-207ENST00000524654 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
CTSB-207ENST00000524654 SLC25A27O95847 323 aa13□□□□□ -0.33
CTSB-207ENST00000524654 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
CTSB-207ENST00000524654 PCP11498 1178 aaKnown RBP13□□□□□ -0.33
CTSB-207ENST00000524654 STAT3P40763 770 aa13□□□□□ -0.33
CTSB-207ENST00000524654 HAND2P61296 217 aa13□□□□□ -0.33
CTSB-207ENST00000524654 SLFN13Q68D06 897 aa13□□□□□ -0.33
CTSB-207ENST00000524654 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
CTSB-207ENST00000524654 NPLOC4Q8TAT6 608 aa13□□□□□ -0.33
CTSB-207ENST00000524654 STAG1Q8WVM7 1258 aa13□□□□□ -0.33
CTSB-207ENST00000524654 GMCL1Q96IK5 515 aa13□□□□□ -0.33
CTSB-207ENST00000524654 IL25Q9H293 177 aa13□□□□□ -0.33
CTSB-207ENST00000524654 FEM1BQ9UK73 627 aa13□□□□□ -0.33
CTSB-207ENST00000524654 STX8Q9UNK0 236 aa13□□□□□ -0.33
CTSB-207ENST00000524654 ATP2A1O14983 1001 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 COBLO75128 1261 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 FARP2O94887 1054 aaPredicted RBP12.99□□□□□ -0.33
CTSB-207ENST00000524654 FCER1AP12319 257 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 BMP3P12645 472 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 AKNAD1Q5T1N1 836 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 DPP9Q86TI2 863 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 TBC1D10CQ8IV04 446 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 DSCC1Q9BVC3 393 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
CTSB-207ENST00000524654 MYH8P13535 1937 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 ZNF213O14771 459 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 CCND3P30281 292 aaPredicted RBP12.98□□□□□ -0.33
CTSB-207ENST00000524654 COPB2P35606 906 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 RRP12Q5JTH9 1297 aaKnown RBP12.98□□□□□ -0.33
CTSB-207ENST00000524654 MFSD14CQ5VZR4 134 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 LHX8Q68G74 356 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 TEX13BQ9BXU2 312 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 TOMM22Q9NS69 142 aa12.98□□□□□ -0.33
CTSB-207ENST00000524654 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms