RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 TAB2Q9NYJ8 693 aa12.99□□□□□ -0.33
PTPRK-217ENST00000524534 REXO2Q9Y3B8 237 aaKnown RBP12.99□□□□□ -0.33
PTPRK-217ENST00000524534 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
PTPRK-217ENST00000524534 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 LEKR1Q6ZMV7 388 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 TRAPPC11Q7Z392 1133 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 ANKRD20A12PQ8NF67 263 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 NELFBQ8WX92 580 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 EPN1Q9Y6I3 576 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-217ENST00000524534 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-217ENST00000524534 PSMD14O00487 310 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 NDUFA10O95299 355 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 TROAPQ12815 778 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 ZNF658Q5TYW1 1059 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-217ENST00000524534 NCAPH2Q6IBW4 605 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 CATIPQ7Z7H3 387 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 SDR42E1Q8WUS8 393 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 CHP1Q99653 195 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 MED4Q9NPJ6 270 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 LRP2BPQ9P2M1 347 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
PTPRK-217ENST00000524534 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 CYP7A1P22680 504 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 IL17AQ16552 155 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 IFIT1BQ5T764 474 aaKnown RBP12.97□□□□□ -0.33
PTPRK-217ENST00000524534 RASSF4Q9H2L5 321 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 VIPAS39Q9H9C1 493 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 SLIT2O94813 1529 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-217ENST00000524534 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 USP14P54578 494 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 TMTC3Q6ZXV5 915 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 ACBD3Q9H3P7 528 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 HAUS4Q9H6D7 363 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
PTPRK-217ENST00000524534 RRP15Q9Y3B9 282 aaKnown RBP12.97□□□□□ -0.33
PTPRK-217ENST00000524534 NUP98P52948 1817 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 MYH8P13535 1937 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 H7C1D1 291 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 FGRP09769 529 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 CALM1P0DP23 149 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 CALM2P0DP24 149 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 CALM3P0DP25 149 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 UBXN1Q04323 297 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 CCDC148Q8NFR7 591 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 CCDC102AQ96A19 550 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 TRIM34Q9BYJ4 488 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 TRIM10Q9UDY6 481 aa12.96□□□□□ -0.33
PTPRK-217ENST00000524534 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-217ENST00000524534 SOS2Q07890 1332 aaPredicted RBP12.96□□□□□ -0.34
PTPRK-217ENST00000524534 CNTNAP5Q8WYK1 1306 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 DUOX1Q9NRD9 1551 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 A0A1W2PQC6 194 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 TTC26A0AVF1 554 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 TRIM66O15016 1216 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 DDAH1O94760 285 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 RPN1P04843 607 aaKnown RBP12.96□□□□□ -0.34
PTPRK-217ENST00000524534 AARSP49588 968 aaKnown RBP eCLIP12.96□□□□□ -0.34
PTPRK-217ENST00000524534 ZNF662Q6ZS27 426 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 DZIP3Q86Y13 1208 aaKnown RBP12.96□□□□□ -0.34
PTPRK-217ENST00000524534 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 GUCA1BQ9UMX6 200 aa12.96□□□□□ -0.34
PTPRK-217ENST00000524534 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
PTPRK-217ENST00000524534 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
PTPRK-217ENST00000524534 PRCPP42785 496 aa12.95□□□□□ -0.34
PTPRK-217ENST00000524534 PAPD7Q5XG87 772 aaKnown RBP12.95□□□□□ -0.34
PTPRK-217ENST00000524534 MB21D1Q8N884 522 aa12.95□□□□□ -0.34
PTPRK-217ENST00000524534 ZNF507Q8TCN5 953 aa12.95□□□□□ -0.34
PTPRK-217ENST00000524534 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
PTPRK-217ENST00000524534 VGLL3A8MV65 326 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 HERVK_113P62684 666 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 C10orf67Q8IYJ2 551 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 ADSSL1Q8N142 457 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 GDAQ9Y2T3 454 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 LGALS16A8MUM7 142 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 SYF2O95926 243 aaKnown RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 PCP11498 1178 aaKnown RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 MCM3P25205 808 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 LONP1P36776 959 aaKnown RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 ARL6IP4Q66PJ3 421 aaKnown RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 WDR59Q6PJI9 974 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 IQCA1Q86XH1 822 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 C4orf32Q8N8J7 132 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-217ENST00000524534 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
PTPRK-217ENST00000524534 BRIP1Q9BX63 1249 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms