RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 TACC3Q9Y6A5 838 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 RANBP6O60518 1105 aaKnown RBP24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 SOX10P56693 466 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 UBXN2AP68543 259 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 MORN1Q5T089 497 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 GPR142Q7Z601 462 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 PLEKHH3Q7Z736 793 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 SH3TC2Q8TF17 1288 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 GMCL1Q96IK5 515 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 TMEM106CQ9BVX2 250 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 NBPF3Q9H094 633 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 SPATC1LQ9H0A9 340 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 IL17RBQ9NRM6 502 aa24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 TNRC18O15417 2968 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC9-215ENST00000524162 STRNO43815 780 aa24.7■■□□□ 1.54
TRAPPC9-215ENST00000524162 FAM83BQ5T0W9 1011 aa24.7■■□□□ 1.54
TRAPPC9-215ENST00000524162 PRPF38AQ8NAV1 312 aaKnown RBP24.7■■□□□ 1.54
TRAPPC9-215ENST00000524162 TTC14Q96N46 770 aa24.7■■□□□ 1.54
TRAPPC9-215ENST00000524162 ZNFX1Q9P2E3 1918 aaKnown RBP24.7■■□□□ 1.54
TRAPPC9-215ENST00000524162 PLA2G6O60733 806 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 ECM2O94769 699 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 NEFLP07196 543 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 FDX1P10109 184 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 MLLT1Q03111 559 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 IMMTQ16891 758 aaKnown RBP24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 BMP2KLQ5H9B9 411 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 ERICH6BQ5W0A0 696 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 ATG4CQ96DT6 458 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 MROH8Q9H579 483 aa24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 MKI67P46013 3256 aaKnown RBP24.69■■□□□ 1.54
TRAPPC9-215ENST00000524162 SLC15A5A6NIM6 579 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 VWA5AO00534 786 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 SGSM2O43147 1006 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 PEX10O60683 326 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 HOXC6P09630 235 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 COPB2P35606 906 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 ABRAQ8N0Z2 381 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 ESR2Q92731 530 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 CCDC136Q96JN2 1154 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 SLF1Q9BQI6 1058 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 MOV10L1Q9BXT6 1211 aaKnown RBP24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 INCENPQ9NQS7 918 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 FEM1BQ9UK73 627 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 STX8Q9UNK0 236 aa24.68■■□□□ 1.54
TRAPPC9-215ENST00000524162 ATP2A1O14983 1001 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 SLC25A27O95847 323 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 HMGCRP04035 888 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 PTPREP23469 700 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 RGS2P41220 211 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 HAND2P61296 217 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 GRB14Q14449 540 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 CCDC178Q5BJE1 867 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 TBC1D10CQ8IV04 446 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 NKX2-3Q8TAU0 364 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 IL25Q9H293 177 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 IVNS1ABPQ9Y6Y0 642 aa24.67■■□□□ 1.54
TRAPPC9-215ENST00000524162 MAP2K5Q13163 448 aa24.66■■□□□ 1.54
TRAPPC9-215ENST00000524162 SLFN13Q68D06 897 aa24.66■■□□□ 1.54
TRAPPC9-215ENST00000524162 REPS2Q8NFH8 660 aa24.66■■□□□ 1.54
TRAPPC9-215ENST00000524162 CNNM2Q9H8M5 875 aa24.66■■□□□ 1.54
TRAPPC9-215ENST00000524162 FBXO28Q9NVF7 368 aa24.66■■□□□ 1.54
TRAPPC9-215ENST00000524162 GJB1P08034 283 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 TOP1P11387 765 aaKnown RBP24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 BMP3P12645 472 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 TMEM132BQ14DG7 1078 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 RCSD1Q6JBY9 416 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 RIOX2Q8IUF8 465 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 LRRC47Q8N1G4 583 aaKnown RBP24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 APBA2Q99767 749 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 TOMM22Q9NS69 142 aa24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 BIN2Q9UBW5 565 aaPredicted RBP24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 ZNF214Q9UL59 606 aaPredicted RBP24.65■■□□□ 1.54
TRAPPC9-215ENST00000524162 POTEFA5A3E0 1075 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 RAD21O60216 631 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 NMT2O60551 498 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 INHAP05111 366 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 ELNP15502 786 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 OAZ1P54368 228 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 FAM160B2Q86V87 743 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 DGKHQ86XP1 1220 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 CWC22Q9HCG8 908 aaKnown RBP24.64■■□□□ 1.54
TRAPPC9-215ENST00000524162 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 CCL5P13501 91 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 ERCC3P19447 782 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 SLC1A4P43007 532 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 RRP12Q5JTH9 1297 aaKnown RBP24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 MAP3K21Q5TCX8 1036 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 ANKS1AQ92625 1134 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 NUP88Q99567 741 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 KRT23Q9C075 422 aa24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 U3KPZ7 1027 aaPredicted RBP24.63■■□□□ 1.53
TRAPPC9-215ENST00000524162 STAT3P40763 770 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 STAT2P52630 851 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 MTFR1Q15390 333 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 IQCA1Q86XH1 822 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 DCAF4Q8WV16 495 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 MAP4K1Q92918 833 aa24.62■■□□□ 1.53
TRAPPC9-215ENST00000524162 TEX13BQ9BXU2 312 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms