RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
SQLE-203ENST00000518931 ZNF214Q9UL59 606 aaPredicted RBP8.34□□□□□ -1.07
SQLE-203ENST00000518931 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
SQLE-203ENST00000518931 SHISA3A0PJX4 238 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 GP2P55259 537 aaKnown RBP8.33□□□□□ -1.08
SQLE-203ENST00000518931 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
SQLE-203ENST00000518931 BBS9Q3SYG4 887 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 TANGO6Q9C0B7 1094 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 PRDM14Q9GZV8 571 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 PRKAG3Q9UGI9 489 aa8.33□□□□□ -1.08
SQLE-203ENST00000518931 AXDND1Q5T1B0 1012 aaPredicted RBP8.32□□□□□ -1.08
SQLE-203ENST00000518931 ANGEL2Q5VTE6 544 aaKnown RBP8.32□□□□□ -1.08
SQLE-203ENST00000518931 DCAF15Q66K64 600 aa8.32□□□□□ -1.08
SQLE-203ENST00000518931 TMC3Q7Z5M5 1100 aa8.32□□□□□ -1.08
SQLE-203ENST00000518931 TSPYL5Q86VY4 417 aaPredicted RBP8.32□□□□□ -1.08
SQLE-203ENST00000518931 PSMD1Q99460 953 aa8.32□□□□□ -1.08
SQLE-203ENST00000518931 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
SQLE-203ENST00000518931 PCDHB12Q9Y5F1 795 aa8.32□□□□□ -1.08
SQLE-203ENST00000518931 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 SLC7A5Q01650 507 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 ZP2Q05996 745 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 TNNI3KQ59H18 835 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 CREG2Q8IUH2 290 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 C7orf61Q8IZ16 206 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 AGBL5Q8NDL9 886 aa8.31□□□□□ -1.08
SQLE-203ENST00000518931 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
SQLE-203ENST00000518931 SMARCC1Q92922 1105 aaPredicted RBP8.31□□□□□ -1.08
SQLE-203ENST00000518931 CWC22Q9HCG8 908 aaKnown RBP8.31□□□□□ -1.08
SQLE-203ENST00000518931 FUT4P22083 530 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 PLCL1Q15111 1095 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 TMPRSS7Q7RTY8 843 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 CARS2Q9HA77 564 aaKnown RBP8.3□□□□□ -1.08
SQLE-203ENST00000518931 ACTR10Q9NZ32 417 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 LMCD1Q9NZU5 365 aa8.3□□□□□ -1.08
SQLE-203ENST00000518931 R3HCC1Q9Y3T6 440 aaKnown RBP8.3□□□□□ -1.08
SQLE-203ENST00000518931 OAS3Q9Y6K5 1087 aaKnown RBP8.3□□□□□ -1.08
SQLE-203ENST00000518931 CLSTN1O94985 981 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 ESR1P03372 595 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 GAB4Q2WGN9 574 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 LARP1BQ659C4 914 aaKnown RBP8.29□□□□□ -1.08
SQLE-203ENST00000518931 VHLLQ6RSH7 139 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 PI4K2BQ8TCG2 481 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 KLHL6Q8WZ60 621 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 GFOD1Q9NXC2 390 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 PPP1R1BQ9UD71 204 aaPredicted RBP8.29□□□□□ -1.08
SQLE-203ENST00000518931 DUSP13Q9UII6 198 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 MINPP1Q9UNW1 487 aa8.29□□□□□ -1.08
SQLE-203ENST00000518931 LOC100996750A0A140TA64 210 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 MEIS1O00470 390 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 SHOXO15266 292 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 SIGLEC6O43699 453 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
SQLE-203ENST00000518931 PRAMEF1O95521 474 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 NCLP19338 710 aaKnown RBP8.28□□□□□ -1.08
SQLE-203ENST00000518931 CD247P20963 164 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 KIAA1211LQ6NV74 962 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 ANKS3Q6ZW76 656 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 DAGLBQ8NCG7 672 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 SYTL5Q8TDW5 730 aaPredicted RBP8.28□□□□□ -1.08
SQLE-203ENST00000518931 HDAC8Q9BY41 377 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 KRTAP4-6Q9BYQ5 205 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 CHST7Q9NS84 486 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
SQLE-203ENST00000518931 LTKP29376 864 aa8.27□□□□□ -1.09
SQLE-203ENST00000518931 GTF2F1P35269 517 aaKnown RBP eCLIP8.27□□□□□ -1.09
SQLE-203ENST00000518931 TCEAL1Q15170 157 aa8.27□□□□□ -1.09
SQLE-203ENST00000518931 NOL9Q5SY16 702 aaKnown RBP8.27□□□□□ -1.09
SQLE-203ENST00000518931 TICAM2Q86XR7 235 aa8.27□□□□□ -1.09
SQLE-203ENST00000518931 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
SQLE-203ENST00000518931 TCTN2Q96GX1 697 aa8.27□□□□□ -1.09
SQLE-203ENST00000518931 GP6Q9HCN6 339 aa8.27□□□□□ -1.09
SQLE-203ENST00000518931 EGR3Q06889 387 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 HEATR6Q6AI08 1181 aaKnown RBP8.26□□□□□ -1.09
SQLE-203ENST00000518931 SLC23A3Q6PIS1 610 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 USHBP1Q8N6Y0 703 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 ZNF655Q8N720 491 aaPredicted RBP8.26□□□□□ -1.09
SQLE-203ENST00000518931 BRF1Q92994 677 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 HAUS7Q99871 368 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 MBNL3Q9NUK0 354 aaKnown RBP8.26□□□□□ -1.09
SQLE-203ENST00000518931 ADAMTS6Q9UKP5 1117 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 PCDHA11Q9Y5I1 949 aa8.26□□□□□ -1.09
SQLE-203ENST00000518931 CBFA2T2O43439 604 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 KLF4O43474 513 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 DDAH1O94760 285 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 EPHX1P07099 455 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 ZNF445P59923 1031 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 FXNQ16595 210 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 C6orf15Q6UXA7 325 aaPredicted RBP8.25□□□□□ -1.09
SQLE-203ENST00000518931 ADAT2Q7Z6V5 191 aaKnown RBP8.25□□□□□ -1.09
SQLE-203ENST00000518931 CERS3Q8IU89 383 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 DHX38Q92620 1227 aaKnown RBP8.25□□□□□ -1.09
SQLE-203ENST00000518931 DSCC1Q9BVC3 393 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 ST7Q9NRC1 585 aa8.25□□□□□ -1.09
SQLE-203ENST00000518931 RNASE1P07998 156 aaKnown RBP8.24□□□□□ -1.09
SQLE-203ENST00000518931 NCAPHQ15003 741 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms