RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
CTNNA1-202ENST00000517533 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
CTNNA1-202ENST00000517533 JDP2Q8WYK2 163 aa7.67□□□□□ -1.18
CTNNA1-202ENST00000517533 EPN3Q9H201 632 aa7.67□□□□□ -1.18
CTNNA1-202ENST00000517533 SART1O43290 800 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 GAS2O43903 313 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 BMP3P12645 472 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 DALRD3Q5D0E6 543 aaKnown RBP7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 FAM209AQ5JX71 171 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 ZNF227Q86WZ6 799 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 CCDC146Q8IYE0 955 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 KISS1RQ969F8 398 aaPredicted RBP7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 MYRFLQ96LU7 910 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 CEP41Q9BYV8 373 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 PRDM10Q9NQV6 1147 aa7.66□□□□□ -1.18
CTNNA1-202ENST00000517533 C9orf172C9J069 976 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 PIK3R2O00459 728 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 CD247P20963 164 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 MAP4P27816 1152 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 PPP2R2AP63151 447 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 NRG1Q02297 640 aaPredicted RBP7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 AUHQ13825 339 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 TMEM67Q5HYA8 995 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 HEATR6Q6AI08 1181 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 PODNQ7Z5L7 613 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 FAM20CQ8IXL6 584 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 SMC5Q8IY18 1101 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 C7orf61Q8IZ16 206 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 TOP6BLQ8N6T0 577 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 ADCY4Q8NFM4 1077 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 SGSM3Q96HU1 749 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 IER2Q9BTL4 223 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 MKRN2Q9H000 416 aaKnown RBP7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 GP6Q9HCN6 339 aa7.65□□□□□ -1.18
CTNNA1-202ENST00000517533 ZNF143P52747 638 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 TBX4P57082 545 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 ZNF445P59923 1031 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 LRRC47Q8N1G4 583 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 LRRN4CLQ8ND94 238 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 ZSWIM2Q8NEG5 633 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 GATA6Q92908 595 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 SMARCC1Q92922 1105 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 UTP4Q969X6 686 aaKnown RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 MRGPRX3Q96LB0 322 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 FEZ1Q99689 392 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 APBA2Q99767 749 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 SLKQ9H2G2 1235 aaPredicted RBP7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 MINPP1Q9UNW1 487 aa7.64□□□□□ -1.19
CTNNA1-202ENST00000517533 ADMP35318 185 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 CHRNA4P43681 627 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 MASP1P48740 699 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 SF1Q15637 639 aaKnown RBP7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 NBPF9Q3BBW0 867 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 BRF1Q92994 677 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 OSBP2Q969R2 916 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 Q96M66 194 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 FBXL18Q96ME1 805 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 CLUHP3Q96NS8 147 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 DUSP23Q9BVJ7 150 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 PRDM14Q9GZV8 571 aa7.63□□□□□ -1.19
CTNNA1-202ENST00000517533 APBA3O96018 575 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 CYP4F3Q08477 520 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 LONRF2Q1L5Z9 754 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 TMC3Q7Z5M5 1100 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 TXNRD3Q86VQ6 643 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 PPP1R14AQ96A00 147 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 EVI5LQ96CN4 794 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 SPOCK3Q9BQ16 436 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 FAM126AQ9BYI3 521 aaPredicted RBP7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 THRAP3Q9Y2W1 955 aaKnown RBP7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 U3KQE9 123 aa7.62□□□□□ -1.19
CTNNA1-202ENST00000517533 FAM95CA0A1B0GW59 222 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 IQCA1LA6NCM1 817 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 PRR33A8MZF0 331 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 RXRBP28702 533 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 MAP7Q14244 749 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 TCEA2Q15560 299 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 ODR4Q5SWX8 454 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 GPAT2Q6NUI2 795 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 ADAT2Q7Z6V5 191 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 RAVER1Q8IY67 606 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 ARHGEF39Q8N4T4 335 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 BVESQ8NE79 360 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 BTN2A2Q8WVV5 523 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 HEXIM2Q96MH2 286 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 AARSD1Q9BTE6 412 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 TYW1Q9NV66 732 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 WHRNQ9P202 907 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 CGGBP1Q9UFW8 167 aaPredicted RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 EMC9Q9Y3B6 208 aa7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 MRPS23Q9Y3D9 190 aaKnown RBP7.61□□□□□ -1.19
CTNNA1-202ENST00000517533 RAPGEF3O95398 923 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 RHBDL3P58872 404 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 NFKBIBQ15653 356 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
CTNNA1-202ENST00000517533 CD163Q86VB7 1156 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms