RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 INCENPQ9NQS7 918 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TOMM22Q9NS69 142 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 STX8Q9UNK0 236 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 IVNS1ABPQ9Y6Y0 642 aa13.26□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLC15A5A6NIM6 579 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 VWA5AO00534 786 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 INHAP05111 366 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GJB1P08034 283 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CCL5P13501 91 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CAPN2P17655 700 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 EN2P19622 333 aaPredicted RBP13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CYP2B6P20813 491 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RGS2P41220 211 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 HAND2P61296 217 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MTFR1Q15390 333 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MORN1Q5T089 497 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SHCBP1Q8NEM2 672 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 USP6NLQ92738 828 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MOV10L1Q9BXT6 1211 aaKnown RBP13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RNF208Q9H0X6 261 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MROH8Q9H579 483 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FBXO28Q9NVF7 368 aa13.25□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLC25A27O95847 323 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 HMGCRP04035 888 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PTPREP23469 700 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CHMLP26374 656 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PLS1Q14651 629 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RRP12Q5JTH9 1297 aaKnown RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLFN13Q68D06 897 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SAMD1Q6SPF0 538 aaPredicted RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 LRRC47Q8N1G4 583 aaKnown RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ESR2Q92731 530 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TTC14Q96N46 770 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NUP88Q99567 741 aaPredicted RBP13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLF1Q9BQI6 1058 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TCP11L1Q9NUJ3 509 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RAD50Q92878 1312 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 HOXC6P09630 235 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FDX1P10109 184 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 BMP3P12645 472 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ERCC3P19447 782 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 COPB2P35606 906 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 STAT3P40763 770 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NOVP48745 357 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TMEM132BQ14DG7 1078 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
SCARNA16.1-201ENST00000516133 BRCA2P51587 3418 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RPTORQ8N122 1335 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NMT2O60551 498 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ZBED4O75132 1171 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NEFLP07196 543 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ZKSCAN1P17029 563 aaPredicted RBP13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLC1A4P43007 532 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GJA8P48165 433 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 GRB14Q14449 540 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CCDC178Q5BJE1 867 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 APBA2Q99767 749 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 UNC93B1Q9H1C4 597 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 HMX1Q9NP08 348 aaPredicted RBP13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SLC5A4Q9NY91 659 aa13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CTDP1Q9Y5B0 961 aaPredicted RBP13.22□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RLFQ13129 1914 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PLA2G6O60733 806 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 SGPL1O95470 568 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FCER1AP12319 257 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 MCCP23508 829 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 STAT2P52630 851 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RCSD1Q6JBY9 416 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TRIB2Q92519 343 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TEX13BQ9BXU2 312 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 CNNM2Q9H8M5 875 aa13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 PAK6Q9NQU5 681 aaPredicted RBP13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
SCARNA16.1-201ENST00000516133 TMEM232C9JQI7 657 aa13.2□□□□□ -0.3
SCARNA16.1-201ENST00000516133 SGSM2O43147 1006 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms