RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
SMAD1-216ENST00000515527 ZNFX1Q9P2E3 1918 aaKnown RBP16.59■□□□□ 0.25
SMAD1-216ENST00000515527 TAL1P17542 331 aaPredicted RBP16.59■□□□□ 0.25
SMAD1-216ENST00000515527 LRRC24Q50LG9 513 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 CATSPERGQ6ZRH7 1159 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 TRIM67Q6ZTA4 783 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 DZIP1Q86YF9 867 aaKnown RBP16.59■□□□□ 0.25
SMAD1-216ENST00000515527 KLHDC9Q8NEP7 349 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 MOV10L1Q9BXT6 1211 aaKnown RBP16.59■□□□□ 0.25
SMAD1-216ENST00000515527 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
SMAD1-216ENST00000515527 CD4P01730 458 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 ASGR1P07306 291 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 ERCC3P19447 782 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 JAG1P78504 1218 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 FKBP5Q13451 457 aaPredicted RBP16.58■□□□□ 0.24
SMAD1-216ENST00000515527 LBX2Q6XYB7 198 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 EP400NLQ6ZTU2 488 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 SLF2Q8IX21 1173 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 VGLL2Q8N8G2 317 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 NEK9Q8TD19 979 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 SLC9A7Q96T83 725 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 FEZ1Q99689 392 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 ROBO3Q96MS0 1386 aa16.58■□□□□ 0.24
SMAD1-216ENST00000515527 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
SMAD1-216ENST00000515527 GDF11O95390 407 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 GNAI1P63096 354 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
SMAD1-216ENST00000515527 SHROOM1Q2M3G4 852 aaPredicted RBP16.57■□□□□ 0.24
SMAD1-216ENST00000515527 CCSAPQ6IQ19 270 aaPredicted RBP16.57■□□□□ 0.24
SMAD1-216ENST00000515527 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 PCSK9Q8NBP7 692 aaKnown RBP16.57■□□□□ 0.24
SMAD1-216ENST00000515527 SCLYQ96I15 445 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 WDR87Q6ZQQ6 2873 aa16.57■□□□□ 0.24
SMAD1-216ENST00000515527 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 MYADML2A6NDP7 307 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 KDM4AO75164 1064 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 VCPP55072 806 aaKnown RBP16.56■□□□□ 0.24
SMAD1-216ENST00000515527 TSPYL6Q8N831 410 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 POP1Q99575 1024 aaKnown RBP16.56■□□□□ 0.24
SMAD1-216ENST00000515527 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
SMAD1-216ENST00000515527 SALL1Q9NSC2 1324 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
SMAD1-216ENST00000515527 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
SMAD1-216ENST00000515527 ZNF865P0CJ78 1059 aaPredicted RBP16.55■□□□□ 0.24
SMAD1-216ENST00000515527 FLIIQ13045 1269 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 HERC6Q8IVU3 1022 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 RMDN1Q96DB5 314 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 TINF2Q9BSI4 451 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 NOC4LQ9BVI4 516 aaKnown RBP16.55■□□□□ 0.24
SMAD1-216ENST00000515527 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 DMDP11532 3685 aa16.55■□□□□ 0.24
SMAD1-216ENST00000515527 PFKMP08237 780 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 ACTN1P12814 892 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 RHBDL3P58872 404 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 ST3GAL2Q16842 350 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 SHCBP1Q8NEM2 672 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 SPATC1LQ9H0A9 340 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 GNL3LQ9NVN8 582 aaKnown RBP16.54■□□□□ 0.24
SMAD1-216ENST00000515527 CNPY2Q9Y2B0 182 aa16.54■□□□□ 0.24
SMAD1-216ENST00000515527 MROH7-TTC4A0A0A0MT08 1334 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 GRM8O00222 908 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 VCAM1P19320 739 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 FGFR2P21802 821 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 AVPR2P30518 371 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
SMAD1-216ENST00000515527 PLS1Q14651 629 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 ABRAQ8N0Z2 381 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 ZGPATQ8N5A5 531 aaKnown RBP16.53■□□□□ 0.24
SMAD1-216ENST00000515527 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
SMAD1-216ENST00000515527 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
SMAD1-216ENST00000515527 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 GINM1Q9NU53 330 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 PI4KBQ9UBF8 816 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 FAM184BQ9ULE4 1060 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 DNAH14Q0VDD8 3507 aa16.53■□□□□ 0.24
SMAD1-216ENST00000515527 MAP1BP46821 2468 aaKnown RBP16.53■□□□□ 0.24
SMAD1-216ENST00000515527 FCER1AP12319 257 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 CST5P28325 142 aaPredicted RBP16.52■□□□□ 0.24
SMAD1-216ENST00000515527 NBL1P41271 181 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 ACAP1Q15027 740 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 MROH8Q9H579 483 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
SMAD1-216ENST00000515527 ABCF2Q9UG63 623 aa16.52■□□□□ 0.24
SMAD1-216ENST00000515527 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
SMAD1-216ENST00000515527 SCN5AQ14524 2016 aa16.52■□□□□ 0.23
SMAD1-216ENST00000515527 USP14P54578 494 aa16.51■□□□□ 0.23
SMAD1-216ENST00000515527 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms