RNA–Protein interactions for RNA: ENST00000514995.1

DDX60-206, Transcript of DExD/H-box helicase 60, humanhuman

TSL 4

Gene DDX60, Length 534 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-206ENST00000514995 CHMP4CQ96CF2 233 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 C22orf23Q9BZE7 217 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 UPF3BQ9BZI7 483 aaKnown RBP9.62□□□□□ -0.87
DDX60-206ENST00000514995 KIAA1683Q9H0B3 1180 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 VCPKMTQ9H867 229 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 UPF2Q9HAU5 1272 aaKnown RBP9.62□□□□□ -0.87
DDX60-206ENST00000514995 GPHNQ9NQX3 736 aaPredicted RBP9.62□□□□□ -0.87
DDX60-206ENST00000514995 TCP11L1Q9NUJ3 509 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 NYAP2Q9P242 653 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 MTMR7Q9Y216 660 aa9.62□□□□□ -0.87
DDX60-206ENST00000514995 LCTP09848 1927 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
DDX60-206ENST00000514995 CXCL11O14625 94 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 IFIT3O14879 490 aaKnown RBP9.61□□□□□ -0.87
DDX60-206ENST00000514995 NDUFB10O96000 172 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 CETPP11597 493 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 VCAM1P19320 739 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 NOVP48745 357 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 USP14P54578 494 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 ANAPC15P60006 121 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 WTAPQ15007 396 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 SART3Q15020 963 aaKnown RBP9.61□□□□□ -0.87
DDX60-206ENST00000514995 SEC23AQ15436 765 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 SH3D19Q5HYK7 790 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 KIAA1755Q5JYT7 1200 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 IFIT1BQ5T764 474 aaKnown RBP9.61□□□□□ -0.87
DDX60-206ENST00000514995 BLOC1S2Q6QNY1 142 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 C12orf42Q96LP6 360 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 NUP88Q99567 741 aaPredicted RBP9.61□□□□□ -0.87
DDX60-206ENST00000514995 TMEM47Q9BQJ4 181 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 SENP2Q9HC62 589 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 EMILIN3Q9NT22 766 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 TMOD4Q9NZQ9 345 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 CLIP2Q9UDT6 1046 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 TMX2Q9Y320 296 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
DDX60-206ENST00000514995 WDR19Q8NEZ3 1342 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 ERICH2A1L162 156 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 BTBD19C9JJ37 291 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 TOP1P11387 765 aaKnown RBP9.6□□□□□ -0.87
DDX60-206ENST00000514995 RPS6KB1P23443 525 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
DDX60-206ENST00000514995 PNMA1Q8ND90 353 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 TMEM87BQ96K49 555 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 PTPN18Q99952 460 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 TANGO6Q9C0B7 1094 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 RPAP3Q9H6T3 665 aaPredicted RBP9.6□□□□□ -0.87
DDX60-206ENST00000514995 KAT14Q9H8E8 782 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 LY9Q9HBG7 655 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 SCUBE2Q9NQ36 999 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 ISY1Q9ULR0 285 aaKnown RBP9.6□□□□□ -0.87
DDX60-206ENST00000514995 AGTPBP1Q9UPW5 1226 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 CASP8AP2Q9UKL3 1982 aa9.6□□□□□ -0.87
DDX60-206ENST00000514995 ZNFX1Q9P2E3 1918 aaKnown RBP9.6□□□□□ -0.87
DDX60-206ENST00000514995 ZNF236Q9UL36 1845 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 C19orf81C9J6K1 198 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 F5H6K3 240 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 WDR46O15213 610 aaKnown RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 PSMA5P28066 241 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 MAP2K2P36507 400 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 RBM25P49756 843 aaKnown RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 FGD1P98174 961 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 KLRC3Q07444 240 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 CCDC96Q2M329 555 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 CCDC178Q5BJE1 867 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 FAM83BQ5T0W9 1011 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 SLFN13Q68D06 897 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 GPAT2Q6NUI2 795 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 Q6ZUG5 572 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 DHX32Q7L7V1 743 aaKnown RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 FASTKD5Q7L8L6 764 aaKnown RBP9.59□□□□□ -0.87
DDX60-206ENST00000514995 ANKRD23Q86SG2 305 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 DGKHQ86XP1 1220 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 RAB11FIP4Q86YS3 637 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 DNAJC5GQ8N7S2 189 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 GMCL1P1Q8NEA9 526 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 LPAR1Q92633 364 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 MKL1Q969V6 931 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 TBC1D32Q96NH3 1257 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 TM6SF1Q9BZW5 370 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 ZSWIM6Q9HCJ5 1215 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 SYNPO2Q9UMS6 1093 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 DOCK3Q8IZD9 2030 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
DDX60-206ENST00000514995 FRMPD2Q68DX3 1309 aaPredicted RBP9.58□□□□□ -0.88
DDX60-206ENST00000514995 PDHXO00330 501 aa9.58□□□□□ -0.88
DDX60-206ENST00000514995 PPP1R37O75864 691 aa9.58□□□□□ -0.88
DDX60-206ENST00000514995 PDHBP11177 359 aa9.58□□□□□ -0.88
DDX60-206ENST00000514995 EXOSC10Q01780 885 aaKnown RBP9.58□□□□□ -0.88
DDX60-206ENST00000514995 TAF1CQ15572 869 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms