RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RNF111Q6ZNA4 994 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 TMC3Q7Z5M5 1100 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 ZNF655Q8N720 491 aaPredicted RBP5.16□□□□□ -1.58
CHD1-207ENST00000511628 DAGLBQ8NCG7 672 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 PDZD8Q8NEN9 1154 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 SYTL5Q8TDW5 730 aaPredicted RBP5.16□□□□□ -1.58
CHD1-207ENST00000511628 CPLX3Q8WVH0 158 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 FAM84AQ96KN4 292 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 DSCC1Q9BVC3 393 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 NSUN3Q9H649 340 aaKnown RBP5.16□□□□□ -1.58
CHD1-207ENST00000511628 DDX41Q9UJV9 622 aaKnown RBP5.16□□□□□ -1.58
CHD1-207ENST00000511628 PCDHB12Q9Y5F1 795 aa5.16□□□□□ -1.58
CHD1-207ENST00000511628 ZNF503-AS2A6NEH8 195 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 C8AP07357 584 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 SYPP08247 313 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 TRHRP34981 398 aaPredicted RBP5.15□□□□□ -1.59
CHD1-207ENST00000511628 ERVFC1P60507 584 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 NOL9Q5SY16 702 aaKnown RBP5.15□□□□□ -1.59
CHD1-207ENST00000511628 METTL16Q86W50 562 aaKnown RBP5.15□□□□□ -1.59
CHD1-207ENST00000511628 LILRA2Q8N149 483 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 TCTN2Q96GX1 697 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 SPATA32Q96LK8 384 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 FOXP3Q9BZS1 431 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 PRDM14Q9GZV8 571 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 C19orf44Q9H6X5 657 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 DCP1AQ9NPI6 582 aaPredicted RBP5.15□□□□□ -1.59
CHD1-207ENST00000511628 CHST7Q9NS84 486 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 C19orf73Q9NVV2 129 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 GPR160Q9UJ42 338 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 TCFL5Q9UL49 500 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 ZNRF3Q9ULT6 936 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 PPT2Q9UMR5 302 aa5.15□□□□□ -1.59
CHD1-207ENST00000511628 MEIS3P2A8K0S8 358 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 TNFRSF10CO14798 259 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 PRAMEF1O95521 474 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 HPXP02790 462 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 ZGLP1P0C6A0 271 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 PDE6BP35913 854 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 PAK2Q13177 524 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 COL9A2Q14055 689 aaPredicted RBP5.14□□□□□ -1.59
CHD1-207ENST00000511628 ZNF124Q15973 351 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 CWF19L1Q69YN2 538 aaKnown RBP5.14□□□□□ -1.59
CHD1-207ENST00000511628 CCDC81Q6ZN84 652 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 PRR23BQ6ZRT6 265 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 NT5DC4Q86YG4 428 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 ANKS4BQ8N8V4 417 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 PPP1R16BQ96T49 567 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 SLC9A7Q96T83 725 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 TM9SF2Q99805 663 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 EPB41L4BQ9H329 900 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 FAM86C1Q9NVL1 165 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 GFOD1Q9NXC2 390 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 EFR3BQ9Y2G0 817 aa5.14□□□□□ -1.59
CHD1-207ENST00000511628 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.14□□□□□ -1.59
CHD1-207ENST00000511628 KRTAP9-6A0A140TA67 174 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 SIGLEC6O43699 453 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 IGSF3O75054 1194 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 TP53P04637 393 aaPredicted RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 ENDOUP21128 410 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 RAP1GAPP47736 663 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 EIF6P56537 245 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 RACK1P63244 317 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 TEKQ02763 1124 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 SNW1Q13573 536 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 AUHQ13825 339 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 BBS9Q3SYG4 887 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 TDRD10Q5VZ19 366 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 INTS3Q68E01 1043 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 TMEM132EQ6IEE7 984 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 SYDE1Q6ZW31 735 aaPredicted RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 TMEM192Q8IY95 271 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 FBXO15Q8NCQ5 510 aaPredicted RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 GPRASP2Q96D09 838 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 VWCEQ96DN2 955 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 CDADC1Q9BWV3 514 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 HDAC8Q9BY41 377 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 SLC6A17Q9H1V8 727 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 CCSER2Q9H7U1 834 aa5.13□□□□□ -1.59
CHD1-207ENST00000511628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.13□□□□□ -1.59
CHD1-207ENST00000511628 SUCOQ9UBS9 1254 aaKnown RBP5.13□□□□□ -1.59
CHD1-207ENST00000511628 A0A1W2PQ27 194 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 A0A1W2PQ64 194 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 A0A1W2PQC6 194 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 A0A1W2PQD8 194 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 NFIBO00712 420 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 TMEM253P0C7T8 217 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 GUCY2CP25092 1073 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 PPP2R5EQ16537 467 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 CEP128Q6ZU80 1094 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 C7orf61Q8IZ16 206 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 USHBP1Q8N6Y0 703 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 NAT16Q8N8M0 369 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
CHD1-207ENST00000511628 RNF32Q9H0A6 362 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 GINM1Q9NU53 330 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 INPP5FQ9Y2H2 1132 aa5.12□□□□□ -1.59
CHD1-207ENST00000511628 PMS1P54277 932 aaKnown RBP5.11□□□□□ -1.59
CHD1-207ENST00000511628 SNX17Q15036 470 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms