RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ENDOUP21128 410 aaKnown RBP6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 NASPP49321 788 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 TNK2Q07912 1038 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 PKN1Q16512 942 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 SLC23A3Q6PIS1 610 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 C19orf47Q8N9M1 422 aaKnown RBP6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 DTWD2Q8NBA8 298 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 GPR62Q9BZJ7 368 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 MKRN2Q9H000 416 aaKnown RBP6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 PPT2Q9UMR5 302 aa6.52□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZC3H6P61129 1189 aaKnown RBP6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 ARID5AQ03989 594 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 CILP2Q8IUL8 1156 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 UBE2FQ969M7 185 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 PRR13Q9NZ81 148 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZSWIM5Q9P217 1185 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 ST14Q9Y5Y6 855 aa6.51□□□□□ -1.37
HMGB3P13-201ENST00000511263 SSU72P8A0A1W2PR75 194 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 PRR33A8MZF0 331 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 DNAJA2O60884 412 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 TPP2P29144 1249 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 GIPRP48546 466 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZP2Q05996 745 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 NBPF12Q5TAG4 269 aaPredicted RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 SLC43A3Q8NBI5 491 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 PHAXQ9H814 394 aaKnown RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 SEMA3GQ9NS98 782 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 SUCOQ9UBS9 1254 aaKnown RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 R3HCC1Q9Y3T6 440 aaKnown RBP6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 PCDHB12Q9Y5F1 795 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 SCRIBQ14160 1630 aa6.5□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZNF503-AS2A6NEH8 195 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 UBOX5O94941 541 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 NAT2P11245 290 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 RBM10P98175 930 aaKnown RBP6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 LSRQ86X29 649 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 CCDC144CPQ8IYA2 1237 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 Q96M66 194 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 SLC6A18Q96N87 628 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
HMGB3P13-201ENST00000511263 LRRC10BA6NIK2 292 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 LTKP29376 864 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 PMS1P54277 932 aaKnown RBP6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 NMIQ13287 307 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 TCEAL1Q15170 157 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 PPP2R5EQ16537 467 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 CCDC81Q6ZN84 652 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 TSPYL5Q86VY4 417 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZNF655Q8N720 491 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 SYTL5Q8TDW5 730 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 SLC9A7Q96T83 725 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 FBXL21Q9UKT6 434 aa6.48□□□□□ -1.37
HMGB3P13-201ENST00000511263 SRFP11831 508 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 RAC2P15153 192 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 POLR2BP30876 1174 aaKnown RBP6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 MLANAQ16655 118 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 NBPF9Q3BBW0 867 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 ZSWIM9Q86XI8 627 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 CREG2Q8IUH2 290 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 DAGLBQ8NCG7 672 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 FLAD1Q8NFF5 587 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 FAM84AQ96KN4 292 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 SLC38A3Q99624 504 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 CARS2Q9HA77 564 aaKnown RBP6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 ATP13A1Q9HD20 1204 aa6.47□□□□□ -1.37
HMGB3P13-201ENST00000511263 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 PCBP3P57721 371 aaKnown RBP6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 DUSP4Q13115 394 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 GLIPR1L2Q4G1C9 344 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 ANKRD39Q53RE8 183 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 NOL9Q5SY16 702 aaKnown RBP6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 FYB2Q5VWT5 728 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 UNC5AQ6ZN44 842 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 VWCEQ96DN2 955 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 LIN37Q96GY3 246 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 GBP3Q9H0R5 595 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 DUSP15Q9H1R2 295 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 IGSF5Q9NSI5 407 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 CNTNAP4Q9C0A0 1308 aa6.46□□□□□ -1.38
HMGB3P13-201ENST00000511263 BICRAQ9NZM4 1560 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 SIGLEC6O43699 453 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 DNAJA1P31689 397 aaKnown RBP6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 AFMP43652 599 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 CASP7P55210 303 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 SLC7A5Q01650 507 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 RNF111Q6ZNA4 994 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 TTC6Q86TZ1 520 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 TMEM192Q8IY95 271 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 C7orf61Q8IZ16 206 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 ANAPC16Q96DE5 110 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 SHDQ96IW2 340 aa6.45□□□□□ -1.38
HMGB3P13-201ENST00000511263 C8orf37Q96NL8 207 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms