RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 EAPPQ56P03 285 aaPredicted RBP8.48□□□□□ -1.05
GYPB-212ENST00000511198 PCNX4Q63HM2 1172 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 SCARA3Q6AZY7 606 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 LLGL2Q6P1M3 1020 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 NFXL1Q6ZNB6 911 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 PTF1AQ7RTS3 328 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 NPAS4Q8IUM7 802 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 ISL2Q96A47 359 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 ACSBG1Q96GR2 724 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 CCDC39Q9UFE4 941 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 ZC3H7BQ9UGR2 993 aaKnown RBP8.48□□□□□ -1.05
GYPB-212ENST00000511198 PCOLCE2Q9UKZ9 415 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 CYP8B1Q9UNU6 501 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 LMTK2Q8IWU2 1503 aa8.48□□□□□ -1.05
GYPB-212ENST00000511198 NTF4P34130 210 aa8.47□□□□□ -1.05
GYPB-212ENST00000511198 RGS19P49795 217 aa8.47□□□□□ -1.05
GYPB-212ENST00000511198 LRRC14Q15048 493 aa8.47□□□□□ -1.05
GYPB-212ENST00000511198 SV2BQ7L1I2 683 aa8.47□□□□□ -1.05
GYPB-212ENST00000511198 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
GYPB-212ENST00000511198 ABCA3Q99758 1704 aa8.46□□□□□ -1.05
GYPB-212ENST00000511198 RGPD3A6NKT7 1758 aaPredicted RBP8.46□□□□□ -1.05
GYPB-212ENST00000511198 RGPD4Q7Z3J3 1758 aa8.46□□□□□ -1.05
GYPB-212ENST00000511198 DUOX2Q9NRD8 1548 aa8.46□□□□□ -1.05
GYPB-212ENST00000511198 FAM87AP0C7U9 286 aa8.46□□□□□ -1.06
GYPB-212ENST00000511198 PTPN11Q06124 597 aaPredicted RBP8.46□□□□□ -1.06
GYPB-212ENST00000511198 PPM1JQ5JR12 505 aa8.46□□□□□ -1.06
GYPB-212ENST00000511198 TTF2Q9UNY4 1162 aaKnown RBP8.46□□□□□ -1.06
GYPB-212ENST00000511198 CSADQ9Y600 493 aa8.46□□□□□ -1.06
GYPB-212ENST00000511198 SPATA31A1Q5TZJ5 1347 aa8.46□□□□□ -1.06
GYPB-212ENST00000511198 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 FGD1P98174 961 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 CYP27C1Q4G0S4 372 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 C12orf40Q86WS4 652 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
GYPB-212ENST00000511198 STK32BQ9NY57 414 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 PCDHA4Q9UN74 947 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 LRPPRCP42704 1394 aaKnown RBP8.45□□□□□ -1.06
GYPB-212ENST00000511198 ROBO2Q9HCK4 1378 aa8.45□□□□□ -1.06
GYPB-212ENST00000511198 LEFTY1O75610 366 aa8.44□□□□□ -1.06
GYPB-212ENST00000511198 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.44□□□□□ -1.06
GYPB-212ENST00000511198 DUSP23Q9BVJ7 150 aa8.44□□□□□ -1.06
GYPB-212ENST00000511198 KANK1Q14678 1352 aa8.44□□□□□ -1.06
GYPB-212ENST00000511198 INPP5AQ14642 412 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 MCTP1Q6DN14 999 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 UBE3DQ7Z6J8 389 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 FBXO33Q7Z6M2 555 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 GAL3ST3Q96A11 431 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
GYPB-212ENST00000511198 PARP2Q9UGN5 583 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 U3KQE9 123 aa8.43□□□□□ -1.06
GYPB-212ENST00000511198 DAB2P98082 770 aa8.42□□□□□ -1.06
GYPB-212ENST00000511198 ZBTB37Q5TC79 503 aa8.42□□□□□ -1.06
GYPB-212ENST00000511198 TTBK2Q6IQ55 1244 aa8.42□□□□□ -1.06
GYPB-212ENST00000511198 VSIG10LQ86VR7 867 aa8.42□□□□□ -1.06
GYPB-212ENST00000511198 ABHD8Q96I13 439 aa8.42□□□□□ -1.06
GYPB-212ENST00000511198 ANGEL1Q9UNK9 670 aaKnown RBP8.42□□□□□ -1.06
GYPB-212ENST00000511198 COL14A1Q05707 1796 aaKnown RBP8.41□□□□□ -1.06
GYPB-212ENST00000511198 RRBP1Q9P2E9 1410 aaKnown RBP8.41□□□□□ -1.06
GYPB-212ENST00000511198 USP19O94966 1318 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 FANCGO15287 622 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 IRAK1P51617 712 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 CCDC85BQ15834 202 aaPredicted RBP8.41□□□□□ -1.06
GYPB-212ENST00000511198 LRFN4Q6PJG9 635 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 ABI1Q8IZP0 508 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 ADGRE2Q9UHX3 823 aa8.41□□□□□ -1.06
GYPB-212ENST00000511198 ARHGEF28Q8N1W1 1705 aaKnown RBP8.4□□□□□ -1.06
GYPB-212ENST00000511198 TECPR2O15040 1411 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 TNS3Q68CZ2 1445 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 TXNRD1Q16881 649 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 MEI1Q5TIA1 1274 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.4□□□□□ -1.06
GYPB-212ENST00000511198 CYFIP1Q7L576 1253 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 WFDC3Q8IUB2 231 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 GZF1Q9H116 711 aaPredicted RBP8.4□□□□□ -1.06
GYPB-212ENST00000511198 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
GYPB-212ENST00000511198 ERBINQ96RT1 1412 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 SBF2Q86WG5 1849 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 CTSHP09668 335 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 CDK8P49336 464 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 RPS26P62854 115 aaKnown RBP8.39□□□□□ -1.07
GYPB-212ENST00000511198 TAGLNQ01995 201 aaKnown RBP8.39□□□□□ -1.07
GYPB-212ENST00000511198 FAM214BQ7L5A3 538 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 TMC4Q7Z404 712 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 PLD6Q8N2A8 252 aaKnown RBP8.39□□□□□ -1.07
GYPB-212ENST00000511198 TOP6BLQ8N6T0 577 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 ELMO3Q96BJ8 720 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 FBXL18Q96ME1 805 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 NMRK2Q9NPI5 230 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 PAK6Q9NQU5 681 aaPredicted RBP8.39□□□□□ -1.07
GYPB-212ENST00000511198 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
GYPB-212ENST00000511198 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 CEP162Q5TB80 1403 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 KIF15Q9NS87 1388 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 PEAK1Q9H792 1746 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 FOXN1O15353 648 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 TAL1P17542 331 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms