RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 ADAMTS6Q9UKP5 1117 aa11.29□□□□□ -0.6
CHD1-205ENST00000508756 SLC12A7Q9Y666 1083 aa11.29□□□□□ -0.6
CHD1-205ENST00000508756 SHOXO15266 292 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 TMPRSS7Q7RTY8 843 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 CREG2Q8IUH2 290 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
CHD1-205ENST00000508756 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 PCDHB12Q9Y5F1 795 aa11.28□□□□□ -0.6
CHD1-205ENST00000508756 PRAMEF1O95521 474 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 GNPTABQ3T906 1256 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 C7orf61Q8IZ16 206 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 HDAC8Q9BY41 377 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 MBNL3Q9NUK0 354 aaKnown RBP11.27□□□□□ -0.61
CHD1-205ENST00000508756 GFOD1Q9NXC2 390 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 PRKAG3Q9UGI9 489 aa11.27□□□□□ -0.61
CHD1-205ENST00000508756 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
CHD1-205ENST00000508756 BBS9Q3SYG4 887 aa11.26□□□□□ -0.61
CHD1-205ENST00000508756 PI4K2BQ8TCG2 481 aa11.26□□□□□ -0.61
CHD1-205ENST00000508756 SMARCC1Q92922 1105 aaPredicted RBP11.26□□□□□ -0.61
CHD1-205ENST00000508756 LMCD1Q9NZU5 365 aa11.26□□□□□ -0.61
CHD1-205ENST00000508756 SLC7A5Q01650 507 aa11.25□□□□□ -0.61
CHD1-205ENST00000508756 SYTL5Q8TDW5 730 aaPredicted RBP11.25□□□□□ -0.61
CHD1-205ENST00000508756 KLHL6Q8WZ60 621 aa11.25□□□□□ -0.61
CHD1-205ENST00000508756 ACTR10Q9NZ32 417 aa11.25□□□□□ -0.61
CHD1-205ENST00000508756 PCDHA11Q9Y5I1 949 aa11.25□□□□□ -0.61
CHD1-205ENST00000508756 MEIS1O00470 390 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 SIGLEC6O43699 453 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 RNASE1P07998 156 aaKnown RBP11.24□□□□□ -0.61
CHD1-205ENST00000508756 LTKP29376 864 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 SLC23A3Q6PIS1 610 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 ENOX1Q8TC92 643 aaKnown RBP11.24□□□□□ -0.61
CHD1-205ENST00000508756 TANGO6Q9C0B7 1094 aa11.24□□□□□ -0.61
CHD1-205ENST00000508756 CBFA2T2O43439 604 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 EGR3Q06889 387 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 VHLLQ6RSH7 139 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 CHST7Q9NS84 486 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 ADGRE2Q9UHX3 823 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 ZNF451Q9Y4E5 1061 aa11.23□□□□□ -0.61
CHD1-205ENST00000508756 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
CHD1-205ENST00000508756 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
CHD1-205ENST00000508756 HNRNPLLQ8WVV9 542 aaKnown RBP11.22□□□□□ -0.61
CHD1-205ENST00000508756 TCTN2Q96GX1 697 aa11.22□□□□□ -0.61
CHD1-205ENST00000508756 HAUS7Q99871 368 aa11.22□□□□□ -0.61
CHD1-205ENST00000508756 GP6Q9HCN6 339 aa11.22□□□□□ -0.61
CHD1-205ENST00000508756 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
CHD1-205ENST00000508756 KIAA1211LQ6NV74 962 aa11.21□□□□□ -0.61
CHD1-205ENST00000508756 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
CHD1-205ENST00000508756 LRRN4CLQ8ND94 238 aa11.21□□□□□ -0.61
CHD1-205ENST00000508756 RC3H2Q9HBD1 1191 aaKnown RBP11.21□□□□□ -0.61
CHD1-205ENST00000508756 SLAMF8Q9P0V8 285 aa11.21□□□□□ -0.61
CHD1-205ENST00000508756 CD247P20963 164 aa11.2□□□□□ -0.62
CHD1-205ENST00000508756 ZNF445P59923 1031 aa11.2□□□□□ -0.62
CHD1-205ENST00000508756 ANKS3Q6ZW76 656 aa11.2□□□□□ -0.62
CHD1-205ENST00000508756 CBLL1Q75N03 491 aa11.2□□□□□ -0.62
CHD1-205ENST00000508756 BRF1Q92994 677 aa11.2□□□□□ -0.62
CHD1-205ENST00000508756 B2RBV5 119 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 EPHX1P07099 455 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 CTSKP43235 329 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 C6orf15Q6UXA7 325 aaPredicted RBP11.19□□□□□ -0.62
CHD1-205ENST00000508756 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 MICAL1Q8TDZ2 1067 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 ALPK1Q96QP1 1244 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 FOXP3Q9BZS1 431 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 KLHL25Q9H0H3 589 aa11.19□□□□□ -0.62
CHD1-205ENST00000508756 DNAJC25-GNG10A0A024R161 153 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 TEKQ02763 1124 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 RALGPS1Q5JS13 557 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 NOL9Q5SY16 702 aaKnown RBP11.18□□□□□ -0.62
CHD1-205ENST00000508756 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
CHD1-205ENST00000508756 FGD4Q96M96 766 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 PRR13Q9NZ81 148 aa11.18□□□□□ -0.62
CHD1-205ENST00000508756 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
CHD1-205ENST00000508756 IRAK1P51617 712 aa11.17□□□□□ -0.62
CHD1-205ENST00000508756 CRTC3Q6UUV7 619 aa11.17□□□□□ -0.62
CHD1-205ENST00000508756 SUSD2Q9UGT4 822 aa11.17□□□□□ -0.62
CHD1-205ENST00000508756 TCFL5Q9UL49 500 aa11.17□□□□□ -0.62
CHD1-205ENST00000508756 STK10O94804 968 aaKnown RBP11.16□□□□□ -0.62
CHD1-205ENST00000508756 SYPP08247 313 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 ITGA4P13612 1032 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 TCEAL1Q15170 157 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 ADCY4Q8NFM4 1077 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 ADAMTS10Q9H324 1103 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 R3HCC1Q9Y3T6 440 aaKnown RBP11.16□□□□□ -0.62
CHD1-205ENST00000508756 FHOD1Q9Y613 1164 aa11.16□□□□□ -0.62
CHD1-205ENST00000508756 KLF4O43474 513 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 FKTNO75072 461 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 PCBP3P57721 371 aaKnown RBP11.15□□□□□ -0.62
CHD1-205ENST00000508756 NCAPHQ15003 741 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 RNF111Q6ZNA4 994 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 FAM178BQ8IXR5 827 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 FIBCD1Q8N539 461 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 CELF2-AS1Q8N7Q2 184 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 NOL6Q9H6R4 1146 aaKnown RBP11.15□□□□□ -0.62
CHD1-205ENST00000508756 WHRNQ9P202 907 aa11.15□□□□□ -0.62
CHD1-205ENST00000508756 H0Y8X5 98 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms