RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 PLCH1Q4KWH8 1693 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 KAT6BQ8WYB5 2073 aa15.16■□□□□ 0.02
SNCAIP-209ENST00000508017 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 XBP1P17861 261 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 RCAN1P53805 252 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 PAK1Q13153 545 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 IL17AQ16552 155 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 PDXDC2PQ6P474 469 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 RNF41Q9H4P4 317 aaPredicted RBP15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 ZBTB1Q9Y2K1 713 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 RTL9Q8NET4 1388 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 SLIT2O94813 1529 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 STRCP1A6NGW2 1772 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 ATP2C1P98194 919 aaPredicted RBP15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 RWDD2AQ9UIY3 292 aa15.15■□□□□ 0.02
SNCAIP-209ENST00000508017 SOS2Q07890 1332 aaPredicted RBP15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 NDUFA10O95299 355 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 UBXN1Q04323 297 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 FAM71BQ8TC56 605 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 ESR2Q92731 530 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 GBP3Q9H0R5 595 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 MYO1AQ9UBC5 1043 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 EPN1Q9Y6I3 576 aaPredicted RBP15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 TRIM49BA6NDI0 452 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 CYP7A1P22680 504 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 TUBB4BP68371 445 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 TRAPPC11Q7Z392 1133 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 ZSCAN10Q96SZ4 725 aaPredicted RBP15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 MTA3Q9BTC8 594 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 CARD10Q9BWT7 1032 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 RSPH14Q9UHP6 348 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
SNCAIP-209ENST00000508017 TTC26A0AVF1 554 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 ATP1A1P05023 1023 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 HSP90B2PQ58FF3 399 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 WDR93Q6P2C0 686 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 IRF2BP1Q8IU81 584 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 MMS19Q96T76 1030 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 PLEKHA4Q9H4M7 779 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 FAM204AQ9H8W3 233 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 GTPBP6O43824 516 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 VEGFAP15692 232 aaPredicted RBP15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 MCM7P33993 719 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 PRCPP42785 496 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 HERVK_113P62684 666 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 IFIT1BQ5T764 474 aaKnown RBP15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 LRRC31Q6UY01 552 aa15.13■□□□□ 0.01
SNCAIP-209ENST00000508017 BMP15O95972 392 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 CYP19A1P11511 503 aaPredicted RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 EVX2Q03828 476 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 SPAG1Q07617 926 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 TRIM14Q14142 442 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 PIK3AP1Q6ZUJ8 805 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 CAPZA3Q96KX2 299 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 GDAP1L1Q96MZ0 367 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 ITGB4P16144 1822 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 DUOX1Q9NRD9 1551 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 RPS6KA5O75582 802 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 ZMYND10O75800 440 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 SYF2O95926 243 aaKnown RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 RPN1P04843 607 aaKnown RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 IVLP07476 585 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 TNNT3P45378 269 aaPredicted RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 PMS1P54277 932 aaKnown RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 USP14P54578 494 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 TROAPQ12815 778 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 CATIPQ7Z7H3 387 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 CCDC148Q8NFR7 591 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 BRMS1Q9HCU9 246 aa15.12■□□□□ 0.01
SNCAIP-209ENST00000508017 CNTNAP5Q8WYK1 1306 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 RNF40O75150 1001 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 PARP1P09874 1014 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 GSPT2Q8IYD1 628 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 ANKRD20A12PQ8NF67 263 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 ABCF2Q9UG63 623 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 CICQ96RK0 1608 aaPredicted RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 ANKRD65E5RJM6 399 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 PSMD14O00487 310 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 PES1O00541 588 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 DYNLL1P63167 89 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 WDR59Q6PJI9 974 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 TMTC3Q6ZXV5 915 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 DZIP3Q86Y13 1208 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 SRBD1Q8N5C6 995 aaKnown RBP15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 MB21D1Q8N884 522 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
SNCAIP-209ENST00000508017 DISP2A7MBM2 1401 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 MAGEB6P1A0A0J9YX57 407 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 NMT2O60551 498 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 PPP2R5BQ15173 497 aa15.1■□□□□ 0.01
SNCAIP-209ENST00000508017 OR8K1Q8NGG5 319 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms