RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 PNKPQ96T60 521 aa16.98■□□□□ 0.31
HERC6-206ENST00000506714 NUP88Q99567 741 aaPredicted RBP16.98■□□□□ 0.31
HERC6-206ENST00000506714 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 IL6STP40189 918 aaPredicted RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 COPB1P53618 953 aaKnown RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 PAK1Q13153 545 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 MCM6Q14566 821 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 RRAGBQ5VZM2 374 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 DZIP3Q86Y13 1208 aaKnown RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 SMYD4Q8IYR2 804 aaPredicted RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 TNFRSF25Q93038 417 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 SHISA4Q96DD7 197 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 PDE11AQ9HCR9 933 aa16.97■□□□□ 0.31
HERC6-206ENST00000506714 V9GY48 417 aaPredicted RBP16.97■□□□□ 0.31
HERC6-206ENST00000506714 A0A0U1RQJ8 604 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 CASP1P29466 404 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 CCT6AP40227 531 aaKnown RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 LMAN1P49257 510 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ZNF174Q15697 407 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 E2F4Q16254 413 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ACRBPQ8NEB7 543 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ATRIPQ8WXE1 791 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ABCB6Q9NP58 842 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 CYP7A1P22680 504 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ACTN2P35609 894 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ERVK-24P63145 666 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 PTGDRQ13258 359 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 TCP11X2Q5H9J9 407 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ZNF658Q5TYW1 1059 aaPredicted RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.31
HERC6-206ENST00000506714 MYO6Q9UM54 1294 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
HERC6-206ENST00000506714 XDHP47989 1333 aa16.96■□□□□ 0.3
HERC6-206ENST00000506714 DUOX1Q9NRD9 1551 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 MAGEB6P1A0A0J9YX57 407 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 DDAH1O94760 285 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 ARHGAP25P42331 645 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 BCAMP50895 628 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 LEKR1Q6ZMV7 388 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 CAPN2P17655 700 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 MCM3P25205 808 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 KRT9P35527 623 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 IGHMBP2P38935 993 aaKnown RBP16.95■□□□□ 0.3
HERC6-206ENST00000506714 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 HSP90B2PQ58FF3 399 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 WDR93Q6P2C0 686 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 VPS16Q9H269 839 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 VPS18Q9P253 973 aa16.95■□□□□ 0.3
HERC6-206ENST00000506714 H7C1D1 291 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 PRDM1O75626 825 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 IVLP07476 585 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 FAM71BQ8TC56 605 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
HERC6-206ENST00000506714 RHOXF2BP0C7M4 288 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 AMPD2Q01433 879 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 TROAPQ12815 778 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 CASP8Q14790 479 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 TMTC3Q6ZXV5 915 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 NELFBQ8WX92 580 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 SLC4A9Q96Q91 983 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 RHOXF2Q9BQY4 288 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 MED4Q9NPJ6 270 aa16.94■□□□□ 0.3
HERC6-206ENST00000506714 EPN1Q9Y6I3 576 aaPredicted RBP16.94■□□□□ 0.3
HERC6-206ENST00000506714 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
HERC6-206ENST00000506714 FGRP09769 529 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 GYS2P54840 703 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 VSNL1P62760 191 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 NPY5RQ15761 445 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 ARL6IP4Q66PJ3 421 aaKnown RBP16.93■□□□□ 0.3
HERC6-206ENST00000506714 SDR42E1Q8WUS8 393 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 HAUS4Q9H6D7 363 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 SNAP23O00161 211 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 PLEKHA8P1O95397 391 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 TSR1Q2NL82 804 aaKnown RBP16.93■□□□□ 0.3
HERC6-206ENST00000506714 OR8K1Q8NGG5 319 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 SLF1Q9BQI6 1058 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 BLZF1Q9H2G9 400 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 TAB2Q9NYJ8 693 aa16.93■□□□□ 0.3
HERC6-206ENST00000506714 THSD7AQ9UPZ6 1657 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 WNT7AO00755 349 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 RPS6KA5O75582 802 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 NDUFA10O95299 355 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 RPN1P04843 607 aaKnown RBP16.92■□□□□ 0.3
HERC6-206ENST00000506714 LONP1P36776 959 aaKnown RBP16.92■□□□□ 0.3
HERC6-206ENST00000506714 UBXN1Q04323 297 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 STAMQ92783 540 aa16.92■□□□□ 0.3
HERC6-206ENST00000506714 RPGRIP1Q96KN7 1286 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms