RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ZBTB24O43167 697 aaPredicted RBP6.98□□□□□ -1.29
SCLT1-207ENST00000506233 PFKFB2O60825 505 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 TSHZ1Q6ZSZ6 1077 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 ALKBH8Q96BT7 664 aaKnown RBP6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LHX6Q9UPM6 363 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 CDKN1CP49918 316 aaPredicted RBP6.98□□□□□ -1.29
SCLT1-207ENST00000506233 TTC6Q86TZ1 520 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 JAMLQ86YT9 394 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LCORLQ8N3X6 602 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LILRB2Q8N423 598 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LRRC2Q9BYS8 371 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 PDGFDQ9GZP0 370 aaPredicted RBP6.98□□□□□ -1.29
SCLT1-207ENST00000506233 GOLPH3LQ9H4A5 285 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LIMCH1Q9UPQ0 1083 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 G3BP1Q13283 466 aaKnown RBP eCLIP6.98□□□□□ -1.29
SCLT1-207ENST00000506233 COX20Q5RI15 118 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 PACS2Q86VP3 889 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 ENGASEQ8NFI3 743 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 LY9Q9HBG7 655 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 KIAA1468Q9P260 1216 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 KAT6BQ8WYB5 2073 aa6.98□□□□□ -1.29
SCLT1-207ENST00000506233 ROBO3Q96MS0 1386 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 PDS5AQ29RF7 1337 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 PNPLA7Q6ZV29 1317 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 STARD3NLO95772 234 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 IFIT2P09913 472 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 SCTRP47872 440 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 NEXNQ0ZGT2 675 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 CHST3Q7LGC8 479 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 C11orf96Q7Z7L8 435 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 HSCBQ8IWL3 235 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 JAKMIP1Q96N16 626 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 ESYT3A0FGR9 886 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 FOXD4Q12950 439 aaPredicted RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 ALX1Q15699 326 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 HNRNPLLQ8WVV9 542 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 PPP1R9BQ96SB3 815 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 MAP3K14Q99558 947 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 BSDC1Q9NW68 430 aaPredicted RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 USP21Q9UK80 565 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 MKI67P46013 3256 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 SPTBN5Q9NRC6 3674 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 MROH5Q6ZUA9 1318 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 A0A1W2PRU2 124 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 M0R2N6 131 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 PDE6AP16499 860 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 GJB2P29033 226 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 EARS2Q5JPH6 523 aaKnown RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 OLFM4Q6UX06 510 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 Q6ZUG5 572 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 CCDC24Q8N4L8 307 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 LRRC15Q8TF66 581 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 TNFRSF25Q93038 417 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 DMRTB1Q96MA1 342 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 TSPAN10Q9H1Z9 355 aaPredicted RBP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCLT1-207ENST00000506233 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
SCLT1-207ENST00000506233 ZNF532Q9HCE3 1301 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 F13A1P00488 732 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.29
SCLT1-207ENST00000506233 CTHP32929 405 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 GUCY1A2P33402 732 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 TBCELQ5QJ74 424 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 RCSD1Q6JBY9 416 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 SCG3Q8WXD2 468 aaKnown RBP6.96□□□□□ -1.29
SCLT1-207ENST00000506233 MED15Q96RN5 788 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 OSBPL7Q9BZF2 842 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 ANAPC4Q9UJX5 808 aa6.96□□□□□ -1.29
SCLT1-207ENST00000506233 A0A0G2JMZ2 1700 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 TMEM229AB2RXF0 380 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 IRS1P35568 1242 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 C4orf46Q504U0 113 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 C15orf52Q6ZUT6 534 aaKnown RBP6.96□□□□□ -1.3
SCLT1-207ENST00000506233 HS2ST1Q7LGA3 356 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 CCDC83Q8IWF9 413 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 TNS4Q8IZW8 715 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 TMTC2Q8N394 836 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 C7orf43Q8WVR3 580 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 COL26A1Q96A83 441 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 GPRASP2Q96D09 838 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 NCOA5Q9HCD5 579 aaKnown RBP6.96□□□□□ -1.3
SCLT1-207ENST00000506233 ZNF358Q9NW07 568 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 WDR19Q8NEZ3 1342 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 SBF1O95248 1867 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 POU3F3P20264 500 aaPredicted RBP6.96□□□□□ -1.3
SCLT1-207ENST00000506233 BECN1Q14457 450 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 UBE3CQ15386 1083 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 PKN1Q16512 942 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 POTEHQ6S545 545 aa6.96□□□□□ -1.3
SCLT1-207ENST00000506233 WDR81Q562E7 1941 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 C10orf71Q711Q0 1435 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 GPAA1O43292 621 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 KLF4O43474 513 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 TOB1P50616 345 aaPredicted RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 GYS2P54840 703 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 LRRC41Q15345 812 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 PRR5LQ6MZQ0 368 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 SEPT12Q8IYM1 358 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms