RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 PRDM14Q9GZV8 571 aa8.78□□□□□ -1
NIPBL-205ENST00000505998 DUSP15Q9H1R2 295 aaPredicted RBP8.78□□□□□ -1
NIPBL-205ENST00000505998 KLF4O43474 513 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 SNW1Q13573 536 aaKnown RBP8.77□□□□□ -1.01
NIPBL-205ENST00000505998 ARTNQ5T4W7 220 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 DCAF15Q66K64 600 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 KIAA1211LQ6NV74 962 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 FLCNQ8NFG4 579 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 TRIM55Q9BYV6 548 aa8.77□□□□□ -1.01
NIPBL-205ENST00000505998 SCRIBQ14160 1630 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 DDAH1O94760 285 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 WNT11O96014 354 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 SRFP11831 508 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 TPP2P29144 1249 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-205ENST00000505998 NCAPHQ15003 741 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 ANKRD39Q53RE8 183 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 C6orf15Q6UXA7 325 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-205ENST00000505998 TMC3Q7Z5M5 1100 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 KLHL6Q8WZ60 621 aa8.76□□□□□ -1.01
NIPBL-205ENST00000505998 SHISA3A0PJX4 238 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 CD96P40200 585 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 IKZF1Q13422 519 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 HEATR6Q6AI08 1181 aaKnown RBP8.75□□□□□ -1.01
NIPBL-205ENST00000505998 TSPYL5Q86VY4 417 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-205ENST00000505998 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 ENOX1Q8TC92 643 aaKnown RBP8.75□□□□□ -1.01
NIPBL-205ENST00000505998 HAUS7Q99871 368 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 ATP13A1Q9HD20 1204 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 ZFP64Q9NPA5 681 aa8.75□□□□□ -1.01
NIPBL-205ENST00000505998 WASH4PA8MWX3 477 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 U2SURPO15042 1029 aaKnown RBP8.74□□□□□ -1.01
NIPBL-205ENST00000505998 SIGLEC6O43699 453 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 CD8BP10966 210 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 RAB33AQ14088 237 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 TCEAL1Q15170 157 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 NOL9Q5SY16 702 aaKnown RBP8.74□□□□□ -1.01
NIPBL-205ENST00000505998 ANGEL2Q5VTE6 544 aaKnown RBP8.74□□□□□ -1.01
NIPBL-205ENST00000505998 ZNF574Q6ZN55 896 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-205ENST00000505998 TMPRSS7Q7RTY8 843 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 SPRED2Q7Z698 418 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 SYTL5Q8TDW5 730 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-205ENST00000505998 ST7Q9NRC1 585 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 GFOD1Q9NXC2 390 aa8.74□□□□□ -1.01
NIPBL-205ENST00000505998 B2RBV5 119 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 SHOXO15266 292 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 PRAMEF1O95521 474 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 ITGA4P13612 1032 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 CD247P20963 164 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 RBL2Q08999 1139 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 NBPF6Q5VWK0 638 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 CELF2-AS1Q8N7Q2 184 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 NBPF4Q96M43 638 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 GBP3Q9H0R5 595 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 GP6Q9HCN6 339 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 CHST7Q9NS84 486 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 DUSP13Q9UII6 198 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 ZNF451Q9Y4E5 1061 aa8.73□□□□□ -1.01
NIPBL-205ENST00000505998 CBFA2T2O43439 604 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 ADAMTS4O75173 837 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 EPHX1P07099 455 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 NAT2P11245 290 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 DDR2Q16832 855 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 SOGA3Q5TF21 947 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 CREG2Q8IUH2 290 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 DAGLBQ8NCG7 672 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 MICAL1Q8TDZ2 1067 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 UBXN4Q92575 508 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 DNAJC2Q99543 621 aaKnown RBP8.72□□□□□ -1.01
NIPBL-205ENST00000505998 DSCC1Q9BVC3 393 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 HDAC8Q9BY41 377 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 KLHL25Q9H0H3 589 aa8.72□□□□□ -1.01
NIPBL-205ENST00000505998 MEIS1O00470 390 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 GJB6O95452 261 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 LTKP29376 864 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 GAB4Q2WGN9 574 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 NFXL1Q6ZNB6 911 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 ADAT2Q7Z6V5 191 aaKnown RBP8.71□□□□□ -1.02
NIPBL-205ENST00000505998 ZNF655Q8N720 491 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-205ENST00000505998 PMFBP1Q8TBY8 1022 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 BRF1Q92994 677 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 FGD4Q96M96 766 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 PAK6Q9NQU5 681 aaPredicted RBP8.71□□□□□ -1.02
NIPBL-205ENST00000505998 WHRNQ9P202 907 aa8.71□□□□□ -1.02
NIPBL-205ENST00000505998 ANKRD34BA5PLL1 514 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 PPM1BO75688 479 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
NIPBL-205ENST00000505998 ZNF445P59923 1031 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 ZP2Q05996 745 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 WFDC3Q8IUB2 231 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 AGBL5Q8NDL9 886 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 TCTN2Q96GX1 697 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 CARS2Q9HA77 564 aaKnown RBP8.7□□□□□ -1.02
NIPBL-205ENST00000505998 LMCD1Q9NZU5 365 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 FHOD1Q9Y613 1164 aa8.7□□□□□ -1.02
NIPBL-205ENST00000505998 ESR1P03372 595 aa8.69□□□□□ -1.02
NIPBL-205ENST00000505998 APBA2Q99767 749 aa8.69□□□□□ -1.02
NIPBL-205ENST00000505998 USP35Q9P2H5 1018 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms