RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ZSWIM5Q9P217 1185 aa6.28□□□□□ -1.4
CHD1-203ENST00000505657 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
CHD1-203ENST00000505657 SLC5A6Q9Y289 635 aa6.28□□□□□ -1.4
CHD1-203ENST00000505657 SNX11Q9Y5W9 270 aa6.28□□□□□ -1.4
CHD1-203ENST00000505657 SHOXO15266 292 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 SRFP11831 508 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 PMS1P54277 932 aaKnown RBP6.27□□□□□ -1.41
CHD1-203ENST00000505657 CHMP4BP1P59074 171 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 RNF4P78317 190 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 PPP2R5EQ16537 467 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 C19orf47Q8N9M1 422 aaKnown RBP6.27□□□□□ -1.41
CHD1-203ENST00000505657 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 MKRN2Q9H000 416 aaKnown RBP6.27□□□□□ -1.41
CHD1-203ENST00000505657 MINPP1Q9UNW1 487 aa6.27□□□□□ -1.41
CHD1-203ENST00000505657 CARMIL2Q6F5E8 1435 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 DBX1A6NMT0 343 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 TP53P04637 393 aaPredicted RBP6.26□□□□□ -1.41
CHD1-203ENST00000505657 AXDND1Q5T1B0 1012 aaPredicted RBP6.26□□□□□ -1.41
CHD1-203ENST00000505657 DCAF15Q66K64 600 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 SPOCD1Q6ZMY3 1216 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 KLHL6Q8WZ60 621 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 PRDM14Q9GZV8 571 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 PRDM7Q9NQW5 492 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 ZNF214Q9UL59 606 aaPredicted RBP6.26□□□□□ -1.41
CHD1-203ENST00000505657 KCNH3Q9ULD8 1083 aa6.26□□□□□ -1.41
CHD1-203ENST00000505657 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.26□□□□□ -1.41
CHD1-203ENST00000505657 ESR1P03372 595 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 CASP7P55210 303 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 NMIQ13287 307 aaPredicted RBP6.25□□□□□ -1.41
CHD1-203ENST00000505657 IKZF1Q13422 519 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 THAP5Q7Z6K1 395 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 CCDC144CPQ8IYA2 1237 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 ASB11Q8WXH4 323 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 PRKAG3Q9UGI9 489 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 ADAMTS6Q9UKP5 1117 aa6.25□□□□□ -1.41
CHD1-203ENST00000505657 B2RBV5 119 aa6.24□□□□□ -1.41
CHD1-203ENST00000505657 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
CHD1-203ENST00000505657 AUHQ13825 339 aaKnown RBP6.24□□□□□ -1.41
CHD1-203ENST00000505657 HNRNPLLQ8WVV9 542 aaKnown RBP6.24□□□□□ -1.41
CHD1-203ENST00000505657 DHRS1Q96LJ7 313 aa6.24□□□□□ -1.41
CHD1-203ENST00000505657 HDAC8Q9BY41 377 aa6.24□□□□□ -1.41
CHD1-203ENST00000505657 CARS2Q9HA77 564 aaKnown RBP6.24□□□□□ -1.41
CHD1-203ENST00000505657 GFOD1Q9NXC2 390 aa6.24□□□□□ -1.41
CHD1-203ENST00000505657 CBFA2T2O43439 604 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 PRAMEF1O95521 474 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 FUT4P22083 530 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 ANGEL2Q5VTE6 544 aaKnown RBP6.23□□□□□ -1.41
CHD1-203ENST00000505657 TSPYL5Q86VY4 417 aaPredicted RBP6.23□□□□□ -1.41
CHD1-203ENST00000505657 C7orf61Q8IZ16 206 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 MICAL1Q8TDZ2 1067 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 TANGO6Q9C0B7 1094 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 PHAXQ9H814 394 aaKnown RBP6.23□□□□□ -1.41
CHD1-203ENST00000505657 ACTR10Q9NZ32 417 aa6.23□□□□□ -1.41
CHD1-203ENST00000505657 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 MEIS1O00470 390 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 ZP2Q05996 745 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 PLCL1Q15111 1095 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 GNPTABQ3T906 1256 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 LARP1BQ659C4 914 aaKnown RBP6.22□□□□□ -1.41
CHD1-203ENST00000505657 CREG2Q8IUH2 290 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 TRIT1Q9H3H1 467 aaKnown RBP6.22□□□□□ -1.41
CHD1-203ENST00000505657 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
CHD1-203ENST00000505657 GPATCH2Q9NW75 528 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 DUSP13Q9UII6 198 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 FBXL21Q9UKT6 434 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 ZNF451Q9Y4E5 1061 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 PCDHB12Q9Y5F1 795 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 PCDHA11Q9Y5I1 949 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 SLC12A7Q9Y666 1083 aa6.22□□□□□ -1.41
CHD1-203ENST00000505657 BIN1O00499 593 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 SIGLEC6O43699 453 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 FARP2O94887 1054 aaPredicted RBP6.21□□□□□ -1.42
CHD1-203ENST00000505657 SLC7A5Q01650 507 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 CLEC16AQ2KHT3 1053 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 KIAA1211LQ6NV74 962 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 VHLLQ6RSH7 139 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.42
CHD1-203ENST00000505657 ANKS3Q6ZW76 656 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 CELF2-AS1Q8N7Q2 184 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 SYTL5Q8TDW5 730 aaPredicted RBP6.21□□□□□ -1.42
CHD1-203ENST00000505657 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
CHD1-203ENST00000505657 SMARCC1Q92922 1105 aaPredicted RBP6.21□□□□□ -1.42
CHD1-203ENST00000505657 HAUS7Q99871 368 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 GP6Q9HCN6 339 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 SUSD2Q9UGT4 822 aa6.21□□□□□ -1.42
CHD1-203ENST00000505657 KLF4O43474 513 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 EPHX1P07099 455 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
CHD1-203ENST00000505657 CTSKP43235 329 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 ZNF445P59923 1031 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 TNNI3KQ59H18 835 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
CHD1-203ENST00000505657 TMPRSS7Q7RTY8 843 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 BRF1Q92994 677 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 TCTN2Q96GX1 697 aa6.2□□□□□ -1.42
CHD1-203ENST00000505657 KLHL25Q9H0H3 589 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms